Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0076 ATGGGAAAGAAGGCGAACCCGCCTCCGGCCTACGTGAGACTGACCCATGACGACACCCGGGAAGACCGAGTGCGCAAAGGGAAGGTCCCTGTGCTCGTTGGGGAGGGTGAGGTGATGGAGAGACTACTCATACCGACAAAGCTGTTCAAGCATCCATACATTGTTGCACTCCTGGAGATGTCTGCTAATGAGTTTGGGTACCAGCAACAAGGAACCCTAAAAATTCCATGTGCTGTGGAATGCCTTAGACGGAGTATTGAGATGATATCAAAGGAGAAGTGA 282 0.5142 MGKKANPPPAYVRLTHDDTREDRVRKGKVPVLVGEGEVMERLLIPTKLFKHPYIVALLEMSANEFGYQQQGTLKIPCAVECLRRSIEMISKEK* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0076 93 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 20 84 IPR003676 GO:0009733
Vvi12g0076 93 Pfam Auxin responsive protein 18 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0076 Vvi-Chr12 1253503 1253784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0076 24 83 Calmodulin-binding Proteins AT5G20810 41.667 4.01e-09 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0076 - K14488 vvi:100852705 190.274