Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0058 ATGGACGAGCTGTTGAAGAACAACGTGCTCGCAGCCCATGCAATTGTTGGTGCTGGATCAGTGACTTTGGCCAGTCTTCTCACTTACCCTCTTGATACTCTCAAAACTCTTGTCCAGGTTGGTTCAGGTTCTGGTAAACAGTTGGGTACAGCTCAGATTCTAGATAGGGTTCGGATCTTGTCTGGAACTTCAGGTTTGTACAATGGGTTTGGGTGGTCGACATTGATGAGAATTTCTGGTCTGGGAGCTCGCTTTGGAGTTTATGAAATTTTGACAGCTTTCCATAAAGATGGCCGAGAAGATAATTATGTGTCTGTTCCTGAGGCATTTACATCAGGAATGGTGGCTGGTGCCATGGAATCACTCATAAGTTCTCCATTTGAAATTATTAAGGTTCGTAAGCAAGTAACTTCTGCTTCTCTCATTCCAAGCTCTAGATCTGTTGCAGAAAAGAGTGCTGTTGTGCCTTCCATTGCAAGATTACTACATGGTTATACTCCAGATCAGAAGGCATTGAACCATTCTGTTGGGTTGTTATCCACCTTGACCAGTAAACATCCTAATATGATTGGTGCCTTACAAGAGTATCCATGGATGATGACTGGCTCTGGGAGACCACCCCCTGTTTTTCATGTTAGGAGGCCATTGGATGTCATTTCTCTAGAGGGATGGGGTGCCTTGTGGCGGGGCCTCCGATCAGGAGTAGTTCGGGATACCATTTTCGGTGGGGTCTTTTTTTCCCTCTGGCAATTCCTACACCGGGCAATGCTTGACTGGAAGGCAGCTGGGATGGATCCATCACCCAGGTCAGACGATGAAATTGGTCCGTTGTCTCCTTTAGCTGTCAGTCTGGCAGCCGGATTTTCTGGTTCTGTTGCTGCTGCTGCTTCTCATTCTTTTGACACTGCCAAAAGTCGATCACAATGTATTGTGTTACCCAAGTACATCTCCACAGAGAGGAGGCTTCTCAAATGGAAACAACCAGGGAGGTGGTATGAGAGATATACCGGGATCCATCCTTCTGATAGGAGCCTCCTACATCGTGGCATTTGGTTGCGGATGGGCCGCAGCGGGTTCGCATCATTCTTGGTTGTAGGAAGTTATTTCTTGGCTGTTGATCAGCTTGCTAGATGA 1134 0.4683 MDELLKNNVLAAHAIVGAGSVTLASLLTYPLDTLKTLVQVGSGSGKQLGTAQILDRVRILSGTSGLYNGFGWSTLMRISGLGARFGVYEILTAFHKDGREDNYVSVPEAFTSGMVAGAMESLISSPFEIIKVRKQVTSASLIPSSRSVAEKSAVVPSIARLLHGYTPDQKALNHSVGLLSTLTSKHPNMIGALQEYPWMMTGSGRPPPVFHVRRPLDVISLEGWGALWRGLRSGVVRDTIFGGVFFSLWQFLHRAMLDWKAAGMDPSPRSDDEIGPLSPLAVSLAAGFSGSVAAAASHSFDTAKSRSQCIVLPKYISTERRLLKWKQPGRWYERYTGIHPSDRSLLHRGIWLRMGRSGFASFLVVGSYFLAVDQLAR* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0058 377 Gene3D Mitochondrial carrier domain 174 370 IPR023395 -
Vvi12g0058 377 Gene3D Mitochondrial carrier domain 2 169 IPR023395 -
Vvi12g0058 377 Pfam Mitochondrial carrier protein 10 93 IPR018108 -
Vvi12g0058 377 Pfam Mitochondrial carrier protein 105 256 IPR018108 -
Vvi12g0058 377 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 14 371 - -
Vvi12g0058 377 SUPERFAMILY Mitochondrial carrier 11 360 IPR023395 -
Vvi12g0058 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 94 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi12g0058 Vvi-Chr12 1081591 1092358 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0058 29 268 Antiporters AT1G79900 25.091 2.72e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0058 - - vvi:100260754 739.569