Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0018 ATGGTGAGGGAGCAAAGGGTCGAGTCTTTCTACACTCGGCTACGCGAATCTGTTTCGGCTTCTTCTTCCTCTCCTCTGCTTGTGTTCCCGTCTACATCGGATGTCGATTCGTTGTGTGCCCTGAAAGTAATTTTCCACGTCCTTGAGTCAGATTCTGTTCGATATGCATGCTATCCAGTTTCATCGTTCAAGGAGATCCATAAATATGCGGGGCCTAGTTTATGCTCATCGGATCAGCCTGTTTCGATCCTCCTTTTAAACTGGGGATGTCAACGGGATTTGCGAAGGGTTCTGAATTTGGGGCCTGCTGCTCGTGTGTTTGTGGTTGACAGTCATAGACCAATCCATCTCCATAATTTGAGCGATCAGAATGACCAGGTGGTTATTCTTTATACTCAGGATGATGAAAACCAGACTGATTTGGCTTATGATTTTGATGTTTCGGCTTTGGCAAGTGTCAGTGATTTAAACAAAGAGGATGAGGTTGAAGGTAATTCTGATAGCGATGATGAAAATGAAAGTGATAGTGAGGAGGAAGATGGGGGTGGATCTCGGAAACGGAGGAGGGTTTCAGAAGAAAGTGAAGCTGATCCAGTTCAGCTCCTTAGGAAGCTGACAAGGGAGTACTATAATATGGGTACTTTCCATGGTAAGCCTTCTGGGTGTTTGATGTTTGAATTGGCCCATTCTCTGAGAAAGAACACAAATGAATTGCTATGGTTGGCTTGTGTTTCCTTAACCGATCAGTTTGTTCACGAGAGGCTAACAGATGAGAGATACCAAGCTGGGGTTATGGAGCTTGAGCAACATATCAACAGCTCAGGTAATTTGGACACTATTACTTCGGTGACTCTTAAAGATGGAACAAAGATTCGAGCACCTGATTCATCTAGAATTGCCTATGAAGATGAACCAAGACTAATGTTGTTACAAGAGTGGAATTTGTTTGATTCTATGTTGTGTTCTTCCTACATTGCCACTAAATTGAAAACTTGGAGTGACAATGGGATGAAAAAGCTCAAGCTGCTTCTTGCTCGAATGGGATTTGCCCTGGTGGATTGCCAGCAGAAATTTCAATACATGAATCTGGAAGTAAAAAGGAAGATGAAAGATGAGTTTGAACGATTCCTACCTGAGTATGGACTCACAGATTTCTACTACAGAAGTTTCTTGCGGCTACATGGGTATAGTTCAAGGGTTTCTGCAGCAGATGTGGTATATGGGGTTACTGCATTGCTCGAGTCATTCGTGAAATCAGATGGCTCTTCTGCTTCCAAGCAGTTTGGGGTGGCTTTTGATGCATTGTCCTTGAGCAATCTAGATAAATTGAGAAATGGGATGCAGTATGCAATTAGGATACAGAGGGCGATTCTTCGACAAGGAAGTGCAGCAATAACTAAGAGTGGTGCTATAAGGAGTGGAAGAAAATTCAGGTGGGTGAAGCTTGAGGATTCAGCAGATACAAAGCTTTTAGGGTACCCACAAGCATTAACCAAATTCTGTTACTTTCTGATGGATGCCTTGCGAGAGAAGGGAGCAAAAATGAAGCCTTTGCTTTGTGCTTGCTTATCACAAGAACCAAATAAGGTATTAATAGTGGGAGTTTGTGGGAAGCCACGACTTGGGGCAGTTCAAGGAAATGCATTTGGGATTGCATTTAGAAATGCAGCTGAAGAGATCGGAGCTGATTTCTTCCATGAGTTGTTTGAATCTTCATGGATTGTTTTGGATGCAGTTGCAGTTAATTCCTTTATGATCAGGTTAACCGAGAAGCTTTGA 1779 0.4283 MVREQRVESFYTRLRESVSASSSSPLLVFPSTSDVDSLCALKVIFHVLESDSVRYACYPVSSFKEIHKYAGPSLCSSDQPVSILLLNWGCQRDLRRVLNLGPAARVFVVDSHRPIHLHNLSDQNDQVVILYTQDDENQTDLAYDFDVSALASVSDLNKEDEVEGNSDSDDENESDSEEEDGGGSRKRRRVSEESEADPVQLLRKLTREYYNMGTFHGKPSGCLMFELAHSLRKNTNELLWLACVSLTDQFVHERLTDERYQAGVMELEQHINSSGNLDTITSVTLKDGTKIRAPDSSRIAYEDEPRLMLLQEWNLFDSMLCSSYIATKLKTWSDNGMKKLKLLLARMGFALVDCQQKFQYMNLEVKRKMKDEFERFLPEYGLTDFYYRSFLRLHGYSSRVSAADVVYGVTALLESFVKSDGSSASKQFGVAFDALSLSNLDKLRNGMQYAIRIQRAILRQGSAAITKSGAIRSGRKFRWVKLEDSADTKLLGYPQALTKFCYFLMDALREKGAKMKPLLCACLSQEPNKVLIVGVCGKPRLGAVQGNAFGIAFRNAAEEIGADFFHELFESSWIVLDAVAVNSFMIRLTEKL* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0018 592 MobiDBLite consensus disorder prediction 156 197 - -
Vvi12g0018 592 MobiDBLite consensus disorder prediction 162 178 - -
Vvi12g0018 592 PANTHER CDC45-RELATED PROTEIN 1 591 IPR003874 GO:0006270
Vvi12g0018 592 MobiDBLite consensus disorder prediction 179 197 - -
Vvi12g0018 592 Pfam CDC45-like protein 28 415 IPR003874 GO:0006270
Vvi12g0018 592 Pfam CDC45-like protein 419 591 IPR003874 GO:0006270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0018 1 592 Core DNA Replication Machinery Family AT3G25100 76.884 0.0 932
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0018 K06628 - vvi:100253995 1107.05