Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi12g0009 ATGCACATTCGCAAGGTCATACACACCACCTCCGCCTCTACCTCCGCCGTCTCTCTCTACTCTCTCTCAAAGTTGTGTCTTCAGCTTTGTATGGAGGACACAGCGGACAACCACCCATTAGCCATAGGCACATTTCAGAGGAGAGAGAGGAGACAGAAGCCAAAATCAGTCAAGGGCGTGATCAGGAGAAAGAGGGAACATCTGAAGACTGAACACAAGGACGACGGCGGCGGTGGTGGAGGTGATGAAGAGGATGAAGAGGTAGAGCTAGAGGTGGAGAAGAAGATCATGGAGTTGCAGAGGATTGTACCAGGAGGAGAGTGGGTTGGGATTGAAAATTTGTTTGAACAAACCGCTAGTTATATATTGGCCTTGCAGTGTCAGGTGAAAGCCATGAATGCTGTGGCTTCCTTTCTTGAAGGTCTGGACATGGAGAAGAGGAAGCTCGGAGGTTAA 456 0.4956 MHIRKVIHTTSASTSAVSLYSLSKLCLQLCMEDTADNHPLAIGTFQRRERRQKPKSVKGVIRRKREHLKTEHKDDGGGGGGDEEDEEVELEVEKKIMELQRIVPGGEWVGIENLFEQTASYILALQCQVKAMNAVASFLEGLDMEKRKLGG* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi12g0009 151 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 47 139 IPR044660 GO:0006355
Vvi12g0009 151 MobiDBLite consensus disorder prediction 51 66 - -
Vvi12g0009 151 MobiDBLite consensus disorder prediction 47 88 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi12g0009 92 132 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 46.341 7.82e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi12g0009 - - vvi:100257469 266.544