Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g1195 ATGCAGAGGCCGACGACGCGGTTGATGGAGAGGTCGAATACGATGAATAGAGGGAAGCGGACTTTGGAGGGGGAGGAGGAGGAGCAGCCGGAGCGGAAGCGGCCGGCTCTCGCAAGTGTAATAGTGGAAGCTCTCAAGGTGGATAGTCTGCAGAAACTTTGCTCATCCTTGGAACCTATTCTTCGTAGAGTTGTCAGTGAAGAAGTGGAGCGTGCTTTGGCAAAATTAGGCCCTGCCAGGCTCAATGGGAGGTCTTCCCCTAAACGAATTGAAGGACCTGATGGAAGGAACTTGCAGTTGCAGTTTAGGTCCAGGCTGTCTCTTCCCCTTTTTACAGGAGGAAAAGTAGAGGGGGAGCAGGGTGCTGCAATCCATATTGTCCTGGTGGATGCCAACAGCGGCAGTGTTGTAACTTCTGGACCTGAATCCTCTGTAAAACTGGATGTTGTTGTCCTTGAAGGTGATTTCAATAATGAAGATGAAGAGGGCTGGACTCAGGAAGAATTTGACAGTCATGTGGTTAAAGAGCGTGAAGGAAAGAGACCACTTTTAACTGGGGACTTGCAAGTAACACTCAAAGAAGGTGTTGGAACACTAGGAGACCTCACATTTACAGATAATTCTAGTTGGATACGGAGCAGGAAGTTTAGGCTTGGGCTGAAGGTTGCCTTGGGATTTTGTGAAGGCATACACATACGTGAAGCCAAAACAGAAGCTTTCACTGTTAAAGATCACAGGGGGGAATTGTATAAGAAACACTATCCACCTGCATTAACTGATGATGTGTGGAGATTGGAGAAGATTGGCAAGGATGGTTCATTCCACAAGAGGCTAAATAATTCCCACATTTACACAGTGGAAGATTTCCTCCGGCTTGTGGTTAGAGACTCCCAAAAATTGCGGAGTATCCTGGGAAGTGGCATGTCAAATAAGATGTGGGAGGCTCTTATAGAGCATGCAAAGACTTGCACCATGAGTGGAAAGTTCTATGTTTATTATTCTGATGATACAAGAAATGTTGGTGTTATTTTTAACAACATCTATGAGCTGAGTGGTCTTATTGCTGGGGAGCAGTATTTCTCTGCTGATTCTCTTTCTGAGAGCCAAAAGGTCTATGTCGATAACTTGGTTAAGAAAGCATACGAAAACTGGAATCAAGTTGAAGAGTATGATGGCAAGTCTTTGAGCTTCAAGCAAATTATCAGGTCAAGTACATCGCGAAATGAACATATGATAGGCTCCATGGATTATCCTACTGCTTTAGAGCCTCTGCTACCTCTTCCACGTCCGCCAGTTGCAGGTCCTTCTGAGCAGTCCTTGATGGATCCAGGCATATCAGTTGGAGGTTCAGGGTACAATGATGGTCTTGCAACCAGATACACGGCTCAGCCCCAGCTTGTAAATTCCAGTTCCCGTGCCCAGTTTGATGGCCCTTCATTCCCTTCACATGACCAGCTGGTCAACAATTCTCACCAAATCCAAAGCACTAGGAACGATAGCAGTGTTGGTTTGGCCCTTGGTCCACCACAGTCATCTACAATGGGGTTCCAGGCTCTCAACTCATCTATTCAGCACTCCAATCTTAACCCTTTTAGTGACTTGTTGAATAACCGAGACAAGGGAGTTGATGACTATTTCACGGAGGAAGAGATTCGGCTTAGAAGTCATGAGATGCTTGAGAGCGATGATATGCAGCAATTGCTCCGAGTCTTCAGCATGGGAGGCCATATTATTCCCGATGATGGGTATGGTTTCCCACCATACATGGCATCGCCTTCAAACTGTCTCTATGAGGAGGAGGATCGAAGCCGTCCTGGAAAAGCTGTTGTCGGTTGGCTGAAGATCAAGGCAGCAATGAGGTGGGGCTTCTTTATCAGGAAGAAAGCAGCAGAGAAGCGGGCACAGCTTGTTGAGTTAGAAGATGATTAG 1929 0.465 MQRPTTRLMERSNTMNRGKRTLEGEEEEQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARLNGRSSPKRIEGPDGRNLQLQFRSRLSLPLFTGGKVEGEQGAAIHIVLVDANSGSVVTSGPESSVKLDVVVLEGDFNNEDEEGWTQEEFDSHVVKEREGKRPLLTGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVALGFCEGIHIREAKTEAFTVKDHRGELYKKHYPPALTDDVWRLEKIGKDGSFHKRLNNSHIYTVEDFLRLVVRDSQKLRSILGSGMSNKMWEALIEHAKTCTMSGKFYVYYSDDTRNVGVIFNNIYELSGLIAGEQYFSADSLSESQKVYVDNLVKKAYENWNQVEEYDGKSLSFKQIIRSSTSRNEHMIGSMDYPTALEPLLPLPRPPVAGPSEQSLMDPGISVGGSGYNDGLATRYTAQPQLVNSSSRAQFDGPSFPSHDQLVNNSHQIQSTRNDSSVGLALGPPQSSTMGFQALNSSIQHSNLNPFSDLLNNRDKGVDDYFTEEEIRLRSHEMLESDDMQQLLRVFSMGGHIIPDDGYGFPPYMASPSNCLYEEEDRSRPGKAVVGWLKIKAAMRWGFFIRKKAAEKRAQLVELEDD* 643
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g1195 642 Pfam Calmodulin binding protein C-terminal domain 328 390 IPR046829 -
Vvi11g1195 642 Coils Coil 629 642 - -
Vvi11g1195 642 MobiDBLite consensus disorder prediction 13 34 - -
Vvi11g1195 642 PANTHER OS02G0177800 PROTEIN 17 564 IPR012416 GO:0005516
Vvi11g1195 642 MobiDBLite consensus disorder prediction 1 34 - -
Vvi11g1195 642 Pfam Calmodulin binding protein central domain 258 323 IPR046830 -
Vvi11g1195 642 Pfam Calmodulin binding protein-like N-terminal domain 98 245 IPR046831 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi11g1195 Vvi-Chr11 19034420 19047104 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g1195 12 637 Calmodulin-binding Proteins AT5G57580 67.551 0.0 854
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g1195 - - vvi:100264980 1265.37