Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g1116 ATGGATATCGGAAACAAGCCTGATTCAGACCAGATGGAGGATCATGAGTTGGAGAAGCTCGTCCGCTATGAGGTTGATAAGGCATTGGTATCGTCCGCTGAAGGCTTTGCATGGAGCCGTGCCTTAAACGTTAAGCTTCAACGCGGCGGCCTCAATGTAGGTAGACTTCAAAATTCTTCCATTACTCCACAAACTCAAAAGGCATCGCTTCCGACCAAATTCTCTCCAAACCCTAATCCTAAACCTAGTCAGAAGGACTCGAAAAGGTCTAAAAGATTACAGTGTCTACCGAAACCAAAGAGAGGAGCGGGGACGGAAGGCGAAGAGGTGCAATTTAGGCAGCAGTTGACAAACCTAAGAACCCTTATGCCGGGTGGAAATGAGATGGGTGTAAATGAATTGCTGACAGAAGTGGGAAGCTACTTGGTGGCTTTGGAGCTGCAGGTGAATGTCCTAAGATGCCTTGTGGACACACAATGA 480 0.475 MDIGNKPDSDQMEDHELEKLVRYEVDKALVSSAEGFAWSRALNVKLQRGGLNVGRLQNSSITPQTQKASLPTKFSPNPNPKPSQKDSKRSKRLQCLPKPKRGAGTEGEEVQFRQQLTNLRTLMPGGNEMGVNELLTEVGSYLVALELQVNVLRCLVDTQ* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g1116 159 MobiDBLite consensus disorder prediction 55 109 - -
Vvi11g1116 159 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 16 157 IPR044660 GO:0006355
Vvi11g1116 159 MobiDBLite consensus disorder prediction 55 83 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g1116 21 156 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 32.353 2.15e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g1116 - - vvi:100265076 318.546