Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g1109 ATGATGAGCTTCTTTGGAACCATCCAAACAGCCATAGTGGCAGCCTTTGTGGTCTCATCCTCAGCTTGGGAACTTCAGTGGGATGGAGGCCTAATCCTCATCACCTTATTACTTGGGGGAATTGTAGTGACAGGGTTATCATACTATGTGATGACATGGTCTATTGGCATCAAGGGTCCTGTGTTTTCAGCCTCATTTAACCCACTTCTTGTGCTCTTCTCTTTCCTTTTGAACACCTTTGTTCTGGGTAGTTCAGCCCATTTGGGCAGTATTGTGGGAGCAGTGCTGGTGATTGTGGGTCTTTACCTACTTTTGTGGGCAAAAGCTAATGATGTGGAGAAGAAAGACATGGATGTTGGAGATTCTACTTGCTCTCCCTTGATTCAACCTTGA 393 0.4529 MMSFFGTIQTAIVAAFVVSSSAWELQWDGGLILITLLLGGIVVTGLSYYVMTWSIGIKGPVFSASFNPLLVLFSFLLNTFVLGSSAHLGSIVGAVLVIVGLYLLLWAKANDVEKKDMDVGDSTCSPLIQP* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g1109 130 PANTHER WAT1-RELATED PROTEIN 1 112 IPR030184 GO:0016020|GO:0022857
Vvi11g1109 130 SUPERFAMILY Multidrug resistance efflux transporter EmrE 13 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g1109 Vvi-Chr11 18007642 18008455 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g1109 6 118 Nodulin-like Gene Family AT1G44800 37.719 1.46e-19 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g1109 - - vvi:100256527 233.032