Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g1040 ATGCCTTTCTTGATTGAGAAGTGGGAGATCTTGTGGGATACTCGTAGAACACTGGGCACTAGATCAGTGAACATGAGGGCCATGGAGCTTGGGTGTGCAGTTGTAGTTTTATTTAGCCTTTTGATTGCTGGAAATGCAGAGATTTACATCGTGACAGTTATAGGAGAGCCAGTTATAAGTTACAAGGGTGGTGTACCTGGTTTTGAAGCCACTGCTGTGGAATCTGATGAGACAATTGATGTTACTAGTGAATTGGTTACATCTTACTCTCGTCACCTTGAAATGAAGCACGACATGCTCCTATCGTTGCTGTTTGAGCATGGGACTTACAAGAAGCTCTACAGCTATCGGCATCTTATTAATGGCTTTGCAGTTCATATATCCCCAGAACAGGCAGAAGTCCTTAGACAGGCCCCAGGTGTGAAATCTGTGGAGAGAGATTGGAAGGTGAGAAGACTTACAACACATACTCCACAGTTTCTGGGGCTTCCAACTGGTGTATGGCCGACAGGAGGTGGCTTTGACAGGGCTGGAGAGGACATTGTGATAGGATTTGTGGACTCAGGTATTTTTCCTCACCATCCGAGCTTTGCCACCCACAACGTTGAACCATACGGGCCCATCCCTAAGTACAGAGGAAAATGTGAAGTTGATCCTGACACTAAAAGGAACTTCTGTAATGGGAAGATTGTTGGAGCCCAACATTTTGCAGAAGCTGCAATAGCAGCTGGTTCATTTAATCCTTCAGTTGATTTTGCTTCTCCTTTGGATGGTGATGGGCATGGAAGTCACACAGCAGCTATTGCAGCTGGAAATAATGGAATTCCAGTGAGAATGCATGGGTATGAATTTGGGAAAGCAAGTGGGATGGCTCCCCGTGCCAGGGTTGCTGTATACAAGGCACTCTACCGGCTTTTTGGAGGTTTTGTTGCAGATGTGGTAGCTGCAATTGATCAGGCTGTTCATGATGGTGTGGACATTCTCAATCTCTCTGTGGGGCCAAATAGTCCTCCAGCAACCACCAAGACCACGTTTTTAAACCCTTTTGATGCTGCACTTCTTTCAGCTGTGAAAGCAGGTGTATTTGTTGCACAGGCGGCTGGAAATGGGGGTCCTTTTCCCAAGTCCTTGTTGTCTTATAGTCCGTGGATTGCATCTGTAGCTGCAGCAATCGATGATCGTAGATACAAAAACCATCTTACTTTGGGAAATGGGAAAATCTTACCTGGAATTGGTTTGTCACCTTCTACACATTTCAATCGAACATTCACCCTGGTTGCTGCAAATGATGTGCTGCTGGATTCTTCGGTTGTGAAGTACAGTCCTTCAGACTGCCAAAGACCAGAAGTTCTAAACAAAAACTTGGTTGAAGGGAACATTCTTCTTTGTGGCTATTCCTTCAATTTTGTTGTTGGTACAGCATCAATCAAGAAGGTGTCAGAAACGGCCAAGAGTCTTGGTGCAATTGGGTTTGTTCTTGCTGTGGAAAATGTTTCTCCAGGAACAAAGTTTGATCCTGTTCCTGTCAGTATTCCTGGGATTCTCATCACAGAAGTCAGCAAATCAATGGATCTTATAGAGTACTATAATACATCCACTTCAAGAGATTGGACTGGACGAGTGAAGAGCTTTAAAGCTACAGGTAGCATTGGGGATGGATTGATGCCTATACTCCACAAATCAGCACCTCAGGTGGCATTATTTTCTGCTCGGGGACCCAATATAAGAGATTTCAACTTCCAAGATGCGGATCTTCTCAAACCAGATATTCTAGCTCCAGGTTCTCTCATTTGGGCTGCCTGGTCTCCAAATGGAACAGATGAGGCCAATTATGTTGGAGAAGGGTTTGCAATGATCTCTGGAACTAGCATGGCTGCACCACATATAGCTGGAATAGCTGCCCTTGTAAAGCAGAAACACCCTCATTGGAGCCCTGCTGCCATCAAATCAGCTTTAATGACGACATCAACAACGCTCGACAGAGCTGAAAACCCTCTTCGAGCACAGCAGTATTCTGGATCAGAAACTGTCACACTTGTCACTGCTACACCTTTTGATTATGGGAGTGGCCATGTTACTCCTAGAGCGGCTCTGGATCCTGGACTTATCTTTGATGCAGCTTATGAGGACTACATAGGGTTCTTGTGCACAACACCAGGAATTGATGCTCATGAGATAAAGAACTACACAAGCTTACCATGCAATTACACCATGGGCCGCCCATCAAATCTCAACACCCCATCAATCACAATCTCCCACCTTGTGGGAACTCAAACTGTCACTCGCACAGTCACAAATGTTGCTGGTCTAGAAACCTATGTGATCTCAACCAGAATGGCACCTGCAATTGCCGTTGAAGCCAACCCCCCAGCAATGACTCTGAAACCCGGTGCATCAAGGAAGTTCTCAGTGACACTGACCGCTCGATCAGTGACTGGAACCTACAGTTTTGGAGAAGTTTTGTTGAAAGGAAGCAGAGGACACAAGGTACGAATCCCTGTGGTAGCTATGGCTTATGATCGATAG 2526 0.4553 MPFLIEKWEILWDTRRTLGTRSVNMRAMELGCAVVVLFSLLIAGNAEIYIVTVIGEPVISYKGGVPGFEATAVESDETIDVTSELVTSYSRHLEMKHDMLLSLLFEHGTYKKLYSYRHLINGFAVHISPEQAEVLRQAPGVKSVERDWKVRRLTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIFPHHPSFATHNVEPYGPIPKYRGKCEVDPDTKRNFCNGKIVGAQHFAEAAIAAGSFNPSVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARVAVYKALYRLFGGFVADVVAAIDQAVHDGVDILNLSVGPNSPPATTKTTFLNPFDAALLSAVKAGVFVAQAAGNGGPFPKSLLSYSPWIASVAAAIDDRRYKNHLTLGNGKILPGIGLSPSTHFNRTFTLVAANDVLLDSSVVKYSPSDCQRPEVLNKNLVEGNILLCGYSFNFVVGTASIKKVSETAKSLGAIGFVLAVENVSPGTKFDPVPVSIPGILITEVSKSMDLIEYYNTSTSRDWTGRVKSFKATGSIGDGLMPILHKSAPQVALFSARGPNIRDFNFQDADLLKPDILAPGSLIWAAWSPNGTDEANYVGEGFAMISGTSMAAPHIAGIAALVKQKHPHWSPAAIKSALMTTSTTLDRAENPLRAQQYSGSETVTLVTATPFDYGSGHVTPRAALDPGLIFDAAYEDYIGFLCTTPGIDAHEIKNYTSLPCNYTMGRPSNLNTPSITISHLVGTQTVTRTVTNVAGLETYVISTRMAPAIAVEANPPAMTLKPGASRKFSVTLTARSVTGTYSFGEVLLKGSRGHKVRIPVVAMAYDR* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g1040 841 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 183 194 IPR023827 -
Vvi11g1040 841 Pfam Subtilase family 178 663 IPR000209 GO:0006508|GO:0008236
Vvi11g1040 841 Pfam Peptidase inhibitor I9 87 151 IPR010259 -
Vvi11g1040 841 SUPERFAMILY Protease propeptides/inhibitors 110 151 - -
Vvi11g1040 841 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 43 152 IPR037045 -
Vvi11g1040 841 ProSitePatterns Serine proteases, subtilase family, serine active site. 621 631 IPR023828 -
Vvi11g1040 841 CDD Peptidases_S8_3 154 657 IPR034197 -
Vvi11g1040 841 Pfam Fibronectin type-III domain 743 835 IPR041469 -
Vvi11g1040 841 CDD PA_subtilisin_like 400 538 - -
Vvi11g1040 841 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 107 835 IPR045051 -
Vvi11g1040 841 SUPERFAMILY Subtilisin-like 153 702 IPR036852 GO:0004252|GO:0006508
Vvi11g1040 841 Gene3D - 393 558 - -
Vvi11g1040 841 FunFam Subtilisin-like protease SBT1.5 180 402 - -
Vvi11g1040 841 PRINTS Subtilisin serine protease family (S8) signature 257 270 IPR015500 -
Vvi11g1040 841 PRINTS Subtilisin serine protease family (S8) signature 620 636 IPR015500 -
Vvi11g1040 841 PRINTS Subtilisin serine protease family (S8) signature 178 197 IPR015500 -
Vvi11g1040 841 ProSiteProfiles Serine proteases, subtilase domain profile. 147 698 - -
Vvi11g1040 841 Gene3D Peptidase S8/S53 domain 180 711 IPR036852 GO:0004252|GO:0006508
Vvi11g1040 841 Gene3D - 715 839 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g1040 Vvi-Chr11 16594183 16604354 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g1040 28 841 Subtilisin-like Serine Gene Family AT4G30020 81.740 0.0 1375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g1040 - - vri:117925010 1675.22