Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g1010 ATGGTTGTAGTGAGCTTGAAAGCAAGTTACACAGTGAAGCCATCGGAGCCCACTTTCGATGGTCGTTTATCTCTGTCGGAGTGGGATCAGATTGGAACCATAACTCATGTGCCGACCATCTATTTCTACAGACCCTCACAGGACTGGATTATGCGGGATGGTGACATCTTGGCAACTCTGAGGGACTCATTGAGCCGGGTCTTGGTGCATTTCTACCCGCTTGCCGGTCGTTTGTGCTGGATTCAAGGAAGCCGCCTGGAGCTTGAGTGCAATGCTATGGGGGTTCAGCTGATTGAAGCTGAGTCCCAAGCAACACTAGATGATTTTGGCGATTTCGCTCCATCTCCAGACCTTGAATCCCTTGTCCCTTGTGTAAACTACAACAGTCCAATTCATGAGCTGCCACTGATGCTTGTGCAGCTCACCAAGTTCAGCTGCGGTGGCATCAGCCTCGGCACGTCCATATCACATGCTGTGGCCGATGGCCAGAGCGCACTTCACTTCATCGATGAGTGGGCAAGGCTTGCCCGGGGCGAGCCTTTAGGCACACCGCCATTTCTTGACCGGAAAGTGCTGCGAGCTGGGGATTCCCCAATTGCGCCTCCTTGTTTTGATCATGCAGAATTCAGCCATCCACCGCTATTGATGGGAGCATCAAGTACTGTCGAGGAGAGAAAAAAGGGGACGACTGTATCATTGTTGAAGCTGACCAAAACCCAAGTTGAGAGACTGAAGAAGATGGCCAATGATAGTCGGCCTACAGAATGTGGCCGTCCTTATAGCCGGTACGAGACTATTGCAGCACATATATGGAGATGCGCATGCAACGCGCGTGGTCACAAGCCCGAGCAGCCAACGGCAATAGGTATATGCATTGATTCACGCAGTCGTATGCGGCCACCATTGCCTCAGGGGTACTTTGGCAATGCTACACTTGATGTGATCGCGACTGGCCGCTCCGGTGAGCTAGTGTCAAAGCCATTAGGCTATGCTTCGAGTAGAATAAGAGCAGCAATAGAGAAAGTGACGGACGAATACGTGTGGTCTGCCATAGATTTTCTGAAAAATCAGCCTGACTTGTCACAGTTCCAGGATCTACATGCCTTAGGGAACGATGAAGGACCTTTCTATGGTAACCCAAATCTTGGGGTAATAAGCTGGTTGACGCTACCCATGTACGGGATCGATTTTGGATGGGGGAAGGAGGTGTACATGGGTCCAGGACCCCATGATTTTGATGGTGATTCTTTGATCCTACCAGGTCATGATGGAGATGGATCCTTGGTTGTTGCCTTGTGTTTGCAAGTTGCTCATATGGATGCTTTCAAGAACTTCTTCTACGAAGCCATGGCAGAATCTTCAATAGACTGA 1371 0.5018 MVVVSLKASYTVKPSEPTFDGRLSLSEWDQIGTITHVPTIYFYRPSQDWIMRDGDILATLRDSLSRVLVHFYPLAGRLCWIQGSRLELECNAMGVQLIEAESQATLDDFGDFAPSPDLESLVPCVNYNSPIHELPLMLVQLTKFSCGGISLGTSISHAVADGQSALHFIDEWARLARGEPLGTPPFLDRKVLRAGDSPIAPPCFDHAEFSHPPLLMGASSTVEERKKGTTVSLLKLTKTQVERLKKMANDSRPTECGRPYSRYETIAAHIWRCACNARGHKPEQPTAIGICIDSRSRMRPPLPQGYFGNATLDVIATGRSGELVSKPLGYASSRIRAAIEKVTDEYVWSAIDFLKNQPDLSQFQDLHALGNDEGPFYGNPNLGVISWLTLPMYGIDFGWGKEVYMGPGPHDFDGDSLILPGHDGDGSLVVALCLQVAHMDAFKNFFYEAMAESSID* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g1010 456 FunFam Tryptamine hydroxycinnamoyl transferase 217 447 - -
Vvi11g1010 456 Pfam Transferase family 4 447 - -
Vvi11g1010 456 SUPERFAMILY CoA-dependent acyltransferases 57 185 - -
Vvi11g1010 456 Gene3D - 1 211 IPR023213 -
Vvi11g1010 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 446 - -
Vvi11g1010 456 Gene3D - 218 449 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g1010 Vvi-Chr11 15810540 15811910 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g1010 4 448 Monolignol Biosynthesis Gene Families AT5G48930 40.583 8.18e-115 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g1010 K13065 - vvi:100253912 940.643