Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g1006 ATGCATCTTGTTGATCTGGCCGACAGTGAAAGAAATCCACATGTCCCTTACAGGAATAGTAAACTAACAAAACTTCTTCAAGACTCACTTGGGGGGCAAGCTAAGACACTAATGTTTGTTCACATTAGCCTTGAACCGGATGTTGTTGGAGAAACAATTAGCACAGTTAAATTTGCAGAGCGATTTGCCATGGTAGAACTTGGTGCTGCTTGTGTAAACAAGGATAGTGCAGATGTGAAAGAGTTGAAAGAATAG 255 0.4078 MHLVDLADSERNPHVPYRNSKLTKLLQDSLGGQAKTLMFVHISLEPDVVGETISTVKFAERFAMVELGAACVNKDSADVKELKE* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g1006 84 PANTHER KINESIN-LIKE PROTEIN KLP-3 8 84 IPR027640 GO:0003777|GO:0007018
Vvi11g1006 84 Gene3D Kinesin motor domain 3 84 IPR036961 -
Vvi11g1006 84 ProSiteProfiles Kinesin motor domain profile. 1 65 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi11g1006 84 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 3 84 - -
Vvi11g1006 84 Pfam Kinesin motor domain 6 62 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi11g1006 84 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 71 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g1006 Vvi-Chr11 15747231 15747697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g1006 9 65 Calmodulin-binding Proteins AT5G65930 49.123 9.98e-13 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g1006 K10406 - vri:117928259 135.576