Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g1003 ATGATGAACTCTGCTAGTTTCACCGGCAACAAACTTCATCGTCTTTGCACTTGTTCATCTTTCAAACTGGAATGTCTAGGCCGATCAATCTGCTTTCTAGTCTCATCCTTTTATCGTTTCGTAATTCTCCGGTTCAACACTTTCTCGGTTCAGCTTTGTTATTTCCTGTGTCTTTCATTTCAGGGATTCTGGGTCCTCAAGGCTTTGAAGCCGAGGACTCCTTTGAGGCCTAGAAACTTGGATTTGTTCTTCACCTCTGTGTCGGCAGCTACTGTTTCTAGCATGTCCACAGTGGAAATGGAGGTTTTTTCCAACAACCAGCTTCTGATTTTGACTCTTCTAATGTTTGTAGGCGGAGAGATTTTCACTTCGATGGTAGAACTCCAGTTGTGGAGGTCTAAACTTAAGAAACCATTGATAGCGGAAAACCAAGTCAATTCGGTTAGTAACAATAGCAGTGCTCCTCCGGATCCTAGAAATCCTTTTGGTCAATTTGAGTTGCGGGTGGTAACGGTTCCTAGTACGAGTAATTCAACACTAGAAACTGATGAGGTTCAGAGCCAAATTGAGGGCCGAACTAAGTCATTGTCTAGTGAGTCTCTCAAATACCATTCCATCAAATTTTTAGGCTTTGTGGTGATGGGGTACCTTGTAGTAGTTCATGTCCTTGGAGTCACACTAGTGTCTGCTTACATAGCCCTTGTGTCAAGTGCGAGAGATGTACTAAAGCAAAAGGGCCTCAAGCTCTTCACCTTTTCACTCTTCACCACAGTATCAACTCTTGCAAGTTGCGGTTTTGTCCCGACAAATGAAAACATGATAGTGTTCAGCAAGAACTCAGGCCTGCTTCTTATCATCATTCCTCAGGTCCTTCTCGGGAACACCTTGTTTCCCTCCTGCCTGCGTTTTTCCATATGGACTCTGGGGAAGTTTAAGAAAGTGGAGTCCAATTACCTGTTGACCAACACCAGGGAGATTGGATTTCTGCACTTGCTTCCTAGTCTCCATTCTACTCTTTTGGTTCCTACTGTTCTGGGCTTCATTCTGATACAGTTCACGTTGTTTTGCTCCATGGAGTGGAATTCAGAAGGGTTGAATGGCCTGAATTCTTATCAGAAAATCATCGGTGCCCTCTTCCAGAGCGTGAATTCAAGGCATACAGGCGAAACAATTGTGGATATCTCAATTCTCTCACCTGCCATCTTGGTGTTATTCGTCGTAATGATGTACCTTCCTCCTTATACTTCTTTCCTACCCACAAAAGGTGATGAACAGTCTTCAGAAATATGCAATGGAGGGAGGAAGAGAAGAAGGGGAAAGATTGTGGAGAATTTAATATTCTCACAACTATCGTACCTGGCCATCTTCATCATCCTTATCTGCATAACGGAGAGGAGAAAGATGAAAGATGATCCTCTCAACTTCACAGTGTTAAATATTGTGATAGAAGTAATCAGTGCCTATGGAAATGTTGGGTTTACAGCAGGCTACAGTTGTGAACGGTTGTTGAAACCTGATAGTAGCTGCCAAAGTAAATGGTTTGGATTCTCGGGAAAATGGAGTGACGAGGGGAAAATAATTCTCATTTTTGTCATGTTTTTTGGAAGACTAAAGAAGTTTAATATGGATGGAGGTAGAGCATGGAAGCTCTTGTAA 1656 0.4269 MMNSASFTGNKLHRLCTCSSFKLECLGRSICFLVSSFYRFVILRFNTFSVQLCYFLCLSFQGFWVLKALKPRTPLRPRNLDLFFTSVSAATVSSMSTVEMEVFSNNQLLILTLLMFVGGEIFTSMVELQLWRSKLKKPLIAENQVNSVSNNSSAPPDPRNPFGQFELRVVTVPSTSNSTLETDEVQSQIEGRTKSLSSESLKYHSIKFLGFVVMGYLVVVHVLGVTLVSAYIALVSSARDVLKQKGLKLFTFSLFTTVSTLASCGFVPTNENMIVFSKNSGLLLIIIPQVLLGNTLFPSCLRFSIWTLGKFKKVESNYLLTNTREIGFLHLLPSLHSTLLVPTVLGFILIQFTLFCSMEWNSEGLNGLNSYQKIIGALFQSVNSRHTGETIVDISILSPAILVLFVVMMYLPPYTSFLPTKGDEQSSEICNGGRKRRRGKIVENLIFSQLSYLAIFIILICITERRKMKDDPLNFTVLNIVIEVISAYGNVGFTAGYSCERLLKPDSSCQSKWFGFSGKWSDEGKIILIFVMFFGRLKKFNMDGGRAWKLL* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g1003 551 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 23 550 - -
Vvi11g1003 551 Pfam Cation transport protein 199 538 IPR003445 GO:0006812|GO:0008324|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g1003 Vvi-Chr11 15707762 15711764 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g1003 67 550 Inorganic Solute Cotransporters AT4G10310 51.633 3.66e-155 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g1003 K24976 - vvi:100248819 1013.06