Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g1002 ATGATGAACTCTGCTAGTTTCACCGGCAACAAACTTCATCGTCTTTGCACTTGTTCATCTTTCAAACTGGAATGTCTAGGCCGATCAATCTGCTTTCTAGCCTCATCCTTTTATCGTTTCGTAATTCTCCGGTTCAACACTTTCTTGGTTCAGCTTTGTTATTTCCTGTGTCTTTCATTTCAGGGATTCTGGGTCCTCAAGGCTTTGAAGCCGAGGACTCCTTTGAGGCCTAGAAACTTGGATTTGTTCTTCACCTCTGTGTCGGCAGCTACTGTTTCTAGCATGTCCACAGTCGAAATGGAGGTTTTTTCCAACAACCAGCTTCTGATTTTGACTCTTCTAATGTTTGTAGGCGGAGAGATTTTCACTTCGATGGTAGAACTCCAGTTGTGGAGGTCTAAACTTAAGAAACCATTGATAGCAGAAAACCAAGTCAATTCGGTTAGTAACAATAGCAGTGCTCCTCCGGATCCTAGAAATCCTTTTGGTCAATTTGAGTTGCGCGTGGGCCGAACTAAGTCGTTGTCTAGTGAGTCTCTCAAATACCATTCCATCAAATTTTTAGGCTTTGTGGTGATGGGGTACCTTGTAGTAGTTCATGTCCTTGGAGTCACACTAGTGTCTGCTTACATAGCCCTTGTGTCAAGTGCGAGAGATGTACTAAAGCAAAAGGGCCTCAAGCTCTTCACCTTTTCACTCTTCACCACAGTATCAACTCTTGCAAGTTGCGGTTTTGTCCCGACAAATGAAAACATGATAGTGTTCAGCAAGAACTCAGGCCTGCTTCTTATCATCATTCCTCAGGTCCTTCTCGGGAACACCTTGTTTCCCTCTTGCCTGCGTTTTTCCATATGGACTCTGGGGAAGTTTAAGAAAGTGGAGTCCAATTACCTGTTGATCAGCACAAGGGAGATTGGATTTCTGCACTTGCTTCCTAGTCTCCATTCTACTCTTTTGGTTCCTACTGTTCTGGGCTTCATTCTGATACAGTTCACGTTGTTTTGCTCCATGGAGTGGAATTCAGAAGGGTTGAATGGCCTGAATTCTTATCAGAAAATCATCGGTGCCCTCTTCCAGAGCGTGAATTCAAGGCATACTGGCGAAACAATTGTGGATATCTCAACTCTCTCGCCTGCCATCTTGGTGTTAGTCGTCGTAATGATGTACCTTCCTCCTTATACTTCTTTCCTACCCATAAAAGAAATATGCAATGGAGGGAGGAAGAGAAGAAGGGGAAAGATTGTGGAGAATTTAATATTCTCACAACTATCGTACCTGGCCATCTTCATCATCCTTATCTGCATAACGGAGAGGAAAAAGATGAAAGATGATCCTCTCAACTTCACAGTGTTAAATATTGTGATAGAAGTAATCAGGTAA 1380 0.4304 MMNSASFTGNKLHRLCTCSSFKLECLGRSICFLASSFYRFVILRFNTFLVQLCYFLCLSFQGFWVLKALKPRTPLRPRNLDLFFTSVSAATVSSMSTVEMEVFSNNQLLILTLLMFVGGEIFTSMVELQLWRSKLKKPLIAENQVNSVSNNSSAPPDPRNPFGQFELRVGRTKSLSSESLKYHSIKFLGFVVMGYLVVVHVLGVTLVSAYIALVSSARDVLKQKGLKLFTFSLFTTVSTLASCGFVPTNENMIVFSKNSGLLLIIIPQVLLGNTLFPSCLRFSIWTLGKFKKVESNYLLISTREIGFLHLLPSLHSTLLVPTVLGFILIQFTLFCSMEWNSEGLNGLNSYQKIIGALFQSVNSRHTGETIVDISTLSPAILVLVVVMMYLPPYTSFLPIKEICNGGRKRRRGKIVENLIFSQLSYLAIFIILICITERKKMKDDPLNFTVLNIVIEVIR* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g1002 459 Pfam Cation transport protein 178 391 IPR003445 GO:0006812|GO:0008324|GO:0055085
Vvi11g1002 459 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 24 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g1002 Vvi-Chr11 15685410 15688493 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g1002 67 458 Inorganic Solute Cotransporters AT4G10310 51.861 1.33e-122 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g1002 K24976 - vvi:100243683 801.971