Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g1001 ATGATGATCTCTGCTAGTTTCGTTGGCAAGAGACTTCATCGTCTTTGTACTTGTTTATCTTTCAAACTAGAATGTCTTGGCCGATCAATCTGGTTTCTAGTCTCATCCTTTTACAGCTTGGTAGTTCTTCGGGTCAACCCTTTTTGGATTCAGCTTTGTTATTTCCCATGTCTTTCCTTTCAGGGATTTTTGGTCCTCAAGGCTTTGAAGCCCAGGACTTATTCTTTTAGGCCTAGGAACTTGGATTTGTTCTTCACCTCAGTGTCGGCAGCCACTGTTTCTAGCATGTCCACAGTGGAAATGGAGGTTTTTTCCAACAACCAGCTTCTGATTTTGACGCTTCTCATGTTTGTAGGGGGAGAGGTTTTCACTTCGATGGTAGAACTCCACTTGCGAAGGTCTAAACTTGAGAAGCCATGGATAGCAGAGAACAAAATCGATTCCGTTACTAGCATTAATGGCAGTGCTCCTCTGAGTCCTGGAAAACCTTTTGGTCAAGTTGAGTTGCGGGTGGTAACCGTTCCTAGTACGGACAAGTATTCAAAACTAGAAACAGAGCAGGTTCATAGACAAATTGAGGGCCAAACTGAGTCATTGTCTACTAGTGAGTCTCTCAAATACCGTTCAATCAAATTTTTAGGGTTTGTGGTGATGGGGTACCTCGTAGTAGTTCATGTCGTTGGAGTCGCACTAGTGTCAGCTTACGTAGCCCTTGTGTCAAGTGCCAGAGATGTACTAAAGCAAAAGGGCCTTAAGCTCTTCACCTTTTCACTCTTCACAACAGTTTCTACTTTTGCAAGCTGCGGTTTTGTCCCAACAAATGAAAACATGATAGTGTTCAGCAGCAACTCTGGCCTGCTTCTTATCATCATTCCTCAGGTCCTTCTAGGGAACACCTTGTTTCCATCCTGCCTGCGTTTCTCCATATGGACTCTGGGGAAGTTTTTCAACAAAGCCGAGTCCAATTACCTACTGATGAACGCAAGGGAGATTGGATTTCTGTACTTGCTTCCTAGTCTCCATTCCACTCTTTTGGTTCCTACTGTTCTGGGCTTCATCCTAATACAGTTCACTTTGCTTTGCTCCATGGACTGGAATTCAGAAGGGTTGAATGGCCTGAATTCTTATCAGAAAATCATCGGTGCCCTGTTCCAGAGCGTGAACTCAAGGCATACAGGCGAAACAATTGTGGATATCTCAATTCTCTCACCTGCCATCTTGGTGTTATTCGTCGTAATGATGTACCTTCCTCCTTATACTTCTTTCCTACCCATAGAAGATTATGAACAGTCTTCACCAACATGCAGTGGAAGGAGAAGGAGAAAAAGGGGAAAGATTGTGGAGAATCTAATATTCTCACAACTATCGTACTTGGTCATCTTCATCATCCTTATCTGTATAACGGAGAGGAAAAATATGAAAGATGATCCTCTCAACTTCACTGTGTTAAATATTGTGATAGAAGTGATCAGTGCCTATGGAAATGTTGGGTTCACAGCAGGCTACAGCTGTGAACGGTTGATGAAGCCTGATAGTAGTTGCCAAAGTAAATGGTTTGGATTCTCGGGAAAATGGAGCGATGAAGGGAAAATAATTCTCATTTTGGCCATGTTTTTTGGTAGACTAAAGAAGTTTAATATGGATGGGGGTAGAGCATGGAAGCTCTTGTAA 1671 0.4279 MMISASFVGKRLHRLCTCLSFKLECLGRSIWFLVSSFYSLVVLRVNPFWIQLCYFPCLSFQGFLVLKALKPRTYSFRPRNLDLFFTSVSAATVSSMSTVEMEVFSNNQLLILTLLMFVGGEVFTSMVELHLRRSKLEKPWIAENKIDSVTSINGSAPLSPGKPFGQVELRVVTVPSTDKYSKLETEQVHRQIEGQTESLSTSESLKYRSIKFLGFVVMGYLVVVHVVGVALVSAYVALVSSARDVLKQKGLKLFTFSLFTTVSTFASCGFVPTNENMIVFSSNSGLLLIIIPQVLLGNTLFPSCLRFSIWTLGKFFNKAESNYLLMNAREIGFLYLLPSLHSTLLVPTVLGFILIQFTLLCSMDWNSEGLNGLNSYQKIIGALFQSVNSRHTGETIVDISILSPAILVLFVVMMYLPPYTSFLPIEDYEQSSPTCSGRRRRKRGKIVENLIFSQLSYLVIFIILICITERKNMKDDPLNFTVLNIVIEVISAYGNVGFTAGYSCERLMKPDSSCQSKWFGFSGKWSDEGKIILILAMFFGRLKKFNMDGGRAWKLL* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g1001 556 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 25 555 - -
Vvi11g1001 556 Pfam Cation transport protein 202 543 IPR003445 GO:0006812|GO:0008324|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g1001 Vvi-Chr11 15655460 15663113 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g1001 67 555 Inorganic Solute Cotransporters AT4G10310 50.101 1.56e-152 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g1001 K24976 - vvi:100242150 1015.37