Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0996 ATGGGGATCTTTGCTTCCTTAGGCGAAAAATTTGAGCAGCTTTACAACAATTCACGCGCCAAAATGTCTAGCTTCCGAACATATTTTGTGGGTTTTCTTTGTTCTTTGTTTGATTTCCATGAATTGCAGCTGAACTCATTTGTGTTTCAGTTTTTTTACTACATCATTCTCTCCGTCTTGGGTTTTCTAGCTTTGAAGCTTTCAGTGCTGAAAGCTACCACCATTAGGCTAGCAGACCTTGATCTGTTCTTCACTGCCGTGTCCGCATCAACAGTTTCTAGCATGTCTACGGTGGAAATGGAGCTATTCTCCAACACCCAACTTGTTATCATAACCGCTTTGATGCTAATGGGTGGGGAGATTTTCACTTCCATGCTTAGACTTAACTTTGTGGGCTCCAATTTTACCCAAAAGATAAAAAGTATAGAAAGTAGAGTCCATGATAATCCTTCGACTTCTAGGAACTTTCCTGCAAAGGTTGAGTCGGGTTTGGTAGTTCATCCCCAGTTGAAGGATGAAAAACCCAATTCCATCGTAGAAGATGGAGACAAATCCTTGAGTGGTGAGCATCTGAGGAACTGCTCTATTAAGCTGTTGGGTCATGTAGTCATTCGTTATATTTTTGTGATTCAAATACTGGGCGCTGGTCTGATCTTTCTGTACGTAAGCCTTGTTCCAAGTGCAAAAGAAGTACTGAAGAACAAAGGCATTCAGATGCAAATATTTTCTGTGTTCACAGCGGTGTCCACCTTCTCCAACTGTGGTTTCGTCCCAACAAATGAGAACATGAAGATTTTCAAGAAGAACTCGGGTCTCCTCCTATTTCTCATTCCTCAAGTCCTTCTTGGAAACACATTATTTGCACCCGCCTTGCGGTGCGTCATCTGGGTTCTGGGGAAAACTACAAAGCGGGTAGAGTACGGGTACATGCTGAATAATTCTAGAGAGATAGGATACAACTATTTGCTTCCTAGTGTGCATTCATTTGTTATGGCCATTGTTGTGTTGGTGCTCATAGTATTCGAGTTTCTATTCTTTTGCTCTATGGAGTGGAATTCGGAAGCCTTGTATGGGCTGGATGGAAATGAGAAATTCGTGGCCTCATTGTTCCAAGTTGTAAATCTGAGGCACACTGGTGAATCTGTCTTTGATCTCTCAATCGTCACCCCGGCCGTCTTGGTGGTATTCATAGTAATGATGTACCTTCCGGCTCGTACTTCATTTTTTGCCATAGAGGGGCATGAAACTGATGTGAAAAATGGGGAAGGAAAGACAAAGCAGAAGAGGCTTATGGGCCATGACACCTTCTCGCCCCTCACATTTTTAGTCCCTTTCGTCATTTTTATTTGCATGACTGAAAGAGACAAGCTCAAGGAAGACCCCCTTAACTTCAATGTCTTGAGCATCGCCCTGGAAGTCATTAGTGCATATGCAAATGTTGGATTATCAACTGGGTATCACTGTGCTCGGCAGTTGAAGCCCGACCCCTTCTGCAAACCCGTGTGGTATGGATTTGTTGGAAGATGGAGCGCCGGAGGAAAATTGCTTCTGGTGATCGTCATGTTCCTGGGAAAACTTAGGAAATTTGGCAAGTGA 1596 0.433 MGIFASLGEKFEQLYNNSRAKMSSFRTYFVGFLCSLFDFHELQLNSFVFQFFYYIILSVLGFLALKLSVLKATTIRLADLDLFFTAVSASTVSSMSTVEMELFSNTQLVIITALMLMGGEIFTSMLRLNFVGSNFTQKIKSIESRVHDNPSTSRNFPAKVESGLVVHPQLKDEKPNSIVEDGDKSLSGEHLRNCSIKLLGHVVIRYIFVIQILGAGLIFLYVSLVPSAKEVLKNKGIQMQIFSVFTAVSTFSNCGFVPTNENMKIFKKNSGLLLFLIPQVLLGNTLFAPALRCVIWVLGKTTKRVEYGYMLNNSREIGYNYLLPSVHSFVMAIVVLVLIVFEFLFFCSMEWNSEALYGLDGNEKFVASLFQVVNLRHTGESVFDLSIVTPAVLVVFIVMMYLPARTSFFAIEGHETDVKNGEGKTKQKRLMGHDTFSPLTFLVPFVIFICMTERDKLKEDPLNFNVLSIALEVISAYANVGLSTGYHCARQLKPDPFCKPVWYGFVGRWSAGGKLLLVIVMFLGKLRKFGK* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0996 531 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 39 529 - -
Vvi11g0996 531 Pfam Cation transport protein 195 491 IPR003445 GO:0006812|GO:0008324|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0996 Vvi-Chr11 15426989 15429027 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0996 73 529 Inorganic Solute Cotransporters AT4G10310 48.093 1.01e-131 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0996 K24976 - vvi:100255707 1027.7