Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0992 ATGAAGAAATTTCCCTGTTTTGCAAGGAAACCGGTGGATGTTTTCAATCGTTCATCCACCAAATTGTCTTGCTTGCAACAATCTTTCAGGGGTCTGTTTTCTTCTTTGTTTTATTTCTTAGCCTTCCAGGTAAGCCCATTTTGGAATCAGCTTGGTTACTTCATCACTGTCTCTTTGCTGGGCTATATGGCTTTGAAGGTTTCGAAGCCGAAAACTACCTCATTTATGCCTTCGGACGTTGATGTGTTCTTTACATCGGTGTCTGCATCGACGGTTTCTAGCATGTCTGCGGTGGAAATGGAGGTTTTCTCCGATACCCAACTTGTTATCATGACCGTTTTGATGCTAGTGGGTGGAGAGATTTTCACTTCCATGCTTGGCCTCCAATTTGTGAGGTCCAAGTACACCAGAAAGGCAAATAGAGAGAATAAAGCCCACTTGGCTAGCATAGACTATAAATCTCCGAATTCTAAGATTTCCTTTGATCAAATTGAATTGGGGTTGGTAACTCTTCCACAGGCGCAGAATGAGCAACCCTGTTCCAACTTAGAAAAAGGAATTGAAGCCTCATGTGACGAGGATTTGAAGTACCATTCTATTAAGTGTCTGGGTTATGTGGTTTTGTTTTACCTTCTAGTGGTTCATGTAGTTGGTTCGGCTTTGATAGTTTTGTATCTTAACCTTGTTCCAAGTGCAAGAGAAGTATTAAAGAACAAAGGCCTTCGAATACTAACATTTTCAGTGTTTACAGTGGTTTCTACCTTCTCAAACTGTGGTTTCATCCCCACAAATGAGAATATGGTGGTTTTCAAGAAGAATTCAGGTCTCCTCCTGATTCTTATTCCTCAGATCCTTCTTGGAAACACATTGTTTGCACCATGTTTGCGGTTTGTGATCTGGGTTTTGGTGAAGATCACAAGGCGAGTCGAATTCAACTACATGTTGAAGAACTCTAGGGAGATAAGCTATGATCACTTGCTTCCTGGTTTGTATTCATGTCTTCTGGCTATAACCGTTTTCGGGTTCATATTAGTACAGTTTTTACTTCTTTGCTTCATGGAATGGAATTCAGAAGACTTGGCTGGCCTAAATGCATATCAGAAAATCGTGGGCATGTTGTTTCAAACAGCAAATTCCAGGCATTCTGGTGAATCTATCTTTGATCTTTCAGTTATATCTCCAGCAGTCTTGGTGCTCTTTGTTCTAATGATGCAAGTTGTTGAATCCACTGCAAGGCGCTGA 1242 0.4098 MKKFPCFARKPVDVFNRSSTKLSCLQQSFRGLFSSLFYFLAFQVSPFWNQLGYFITVSLLGYMALKVSKPKTTSFMPSDVDVFFTSVSASTVSSMSAVEMEVFSDTQLVIMTVLMLVGGEIFTSMLGLQFVRSKYTRKANRENKAHLASIDYKSPNSKISFDQIELGLVTLPQAQNEQPCSNLEKGIEASCDEDLKYHSIKCLGYVVLFYLLVVHVVGSALIVLYLNLVPSAREVLKNKGLRILTFSVFTVVSTFSNCGFIPTNENMVVFKKNSGLLLILIPQILLGNTLFAPCLRFVIWVLVKITRRVEFNYMLKNSREISYDHLLPGLYSCLLAITVFGFILVQFLLLCFMEWNSEDLAGLNAYQKIVGMLFQTANSRHSGESIFDLSVISPAVLVLFVLMMQVVESTARR* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0992 413 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 23 404 - -
Vvi11g0992 413 Pfam Cation transport protein 192 406 IPR003445 GO:0006812|GO:0008324|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0992 Vvi-Chr11 15393059 15394817 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0992 66 404 Inorganic Solute Cotransporters AT4G10310 50.147 6.39e-104 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0992 K24976 - vvi:100260789 738.413