Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0987 ATGGTTCATAGAAAAGGATCAACTAGGGTTTCGGAAGATGCAGAAGAGCTTGTCCGCGTCCCTCTTCAGGCCATTCTGTTGGCGGACAGCTTCGCCCAGAAGTTCCGTCCCATCACCCTTGAACGCCCCAAAGTACTGCTGCCATTGGTGAATGTCCCCATGATAGACTACACGTTAGGGTGGCTTGAGTCTGCTGGGATTGAGGAGGTTTTTGTCTTTTGCTGTGCGCATTCGAAACAGGTTATTAAATATTTGGAGAATTCCCATTGGTTTTCTTTGCAACACTTTGAGGTCACCACAATAGAGTCACACAATTCTGTCTGTGCCGGTGATGCTCTGCATCTGATTTACGAGCGGCATGTGATACATGGAGACTTCGTCCTTGTTACTGGAGATACAGTAAGCAACATGTTGCTTACACAGGCACTTCAAGAACATAAGGGTAGAAGGAAGAAGGATAATAATGTTGTAATGACTATGGTTATTAAACGGTCAAAGCCTTCTCTGATTACTCATCAATCTCGACTTGGAACTGATGAGCTGTTTATGGCAATTGATCCTTACACGAAGCAACTTCTATATTATGGGGATAAGGCAGACTGA 603 0.4461 MVHRKGSTRVSEDAEELVRVPLQAILLADSFAQKFRPITLERPKVLLPLVNVPMIDYTLGWLESAGIEEVFVFCCAHSKQVIKYLENSHWFSLQHFEVTTIESHNSVCAGDALHLIYERHVIHGDFVLVTGDTVSNMLLTQALQEHKGRRKKDNNVVMTMVIKRSKPSLITHQSRLGTDELFMAIDPYTKQLLYYGDKAD* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0987 200 SUPERFAMILY Nucleotide-diphospho-sugar transferases 19 186 IPR029044 -
Vvi11g0987 200 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 7 199 - -
Vvi11g0987 200 FunFam Uncharacterized protein 8 182 - -
Vvi11g0987 200 Pfam Nucleotidyl transferase 24 165 IPR005835 GO:0009058
Vvi11g0987 200 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 8 182 IPR029044 -
Vvi11g0987 200 CDD eIF-2B_epsilon_N 22 195 IPR035543 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0987 Vvi-Chr11 15292426 15293628 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0987 2 200 Eukaryotic Initiation Factors Gene Family AT2G34970 67.961 1.45e-89 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0987 K03240 - vvi:100265440 397.897