Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0976 ATGGTCCATAGAAAAGGATCAACTAGGGTTTCGGAAGATGCAGAAGAGCTTGTCCGCGTCCCTCTTCAGGCCATTCTGTTGGCGGACAGCTTCGCCCAGAAGTTCCGTCCCATCACCCTTGAACGCCCCAAAGTAAACTTCCAAACCTCTCTCTCTTTCTCGCTTCCTCTCTCTCTAACGCACTCGTACAAACCGTTATTCACTGTTACTATTTATATTCCATTATTCGTTAATCCGTGCCCTAACTCTATTACTTTGATTTGGGTTTTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGGAGGTTTTTGTCTTTGCTGTGCGCATTCGAAACAGGTTATTAAATATTTGGAGAATTCCCATTGGTTTTCTTTGCAACACTTTGAGGTCACCACAATAGAGTCACACAATTCTGTCTGTGCCGGTGATGCTCTGCATCTGATTTACGAGCGGCATGTGATACATGGAGACTTCGTCCTTGTTACTGGAGATACAGTAAGCAACATGTCGCTTACACAGGCACTTCAAGAACATAAGGGTAGAAGGAAGAAGGATAATAATGCTGTAATGACTATGGTTATTAAACGGTCAAAGCCTTCTCTGATTACTCATCAATCTCGACTTGGTACTGATGAGCTGTTTATGGCAATTGATCCTTACACGAAGCAACTTCTATATTATGGGGATAAGGCAGACTGA 855 0.3392 MVHRKGSTRVSEDAEELVRVPLQAILLADSFAQKFRPITLERPKVNFQTSLSFSLPLSLTHSYKPLFTVTIYIPLFVNPCPNSITLIWVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFCLCCAHSKQVIKYLENSHWFSLQHFEVTTIESHNSVCAGDALHLIYERHVIHGDFVLVTGDTVSNMSLTQALQEHKGRRKKDNNAVMTMVIKRSKPSLITHQSRLGTDELFMAIDPYTKQLLYYGDKAD* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0976 284 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 8 45 - -
Vvi11g0976 284 SUPERFAMILY Nucleotide-diphospho-sugar transferases 156 270 IPR029044 -
Vvi11g0976 284 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 154 266 IPR029044 -
Vvi11g0976 284 Coils Coil 90 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0976 Vvi-Chr11 15101629 15102609 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0976 2 45 Eukaryotic Initiation Factors Gene Family AT2G34970 69.565 5.74e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0976 K03240 - vvi:100265440 265.388