Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0964 ATGCAGACATACCTGCAATCTATCACTGTGCGGCTTGAGGAATGGAGACTCAAGCGAAGAGACACTGAGGAATGGATGAGGCATCGCCAACTCCCTGAAGATTTGAGACAACTTGTTCGGCGTTTTGTTCAATATAAGTGGGTTGCAACTCGAGGAGTAGATGAAGAAGCTATTCTTCGTGGCTTACCTGCGGATCTTCGTCGTGACATTCAACGCCACCTATGCTTGGACCTTGTTCGACGTGTTCCATTCTTCTCTCAGATGGATGATCAGCTACTTGATGCAATCTGTGAGCGTCTAACATCATCTTTAAGCACTGAAGGCACCTATATCGTCCGAGAGGGTGATCCAGTGACAGAGATGCTCTTTATAATTAGAGGAAGGCTGGAGAGTTCTACTACAAATGGAGGCCGTACGGGTTTCTTTAATTCAATTACATTGAGACCTGGAGATTTTTGCGGGGAAGAGCTGCTTGAATGGGCTTTGCTTCGAAAATCTACCCTCAACTTACCTTCTTCTACTAGAACAGTGAGAACCCTCGTTGAAGTGGAAGCCTTTGCACTGCGAGCTGAAGATCTCAAGTTTGTTGCCAACCAATTTAGACGACTGCACAGCAAGAAGCTGCAGCACACTTTCCGGTTCTATTCCCACCATTGGAGGACATGGGCAGCCTGCTTCATACAGGCTGCTTGGCGTAGGTACAAGAGGAGGCTGATGGCTAGAGATCTCACCGTGATGGAATTCTTTTCTTGGGATGAAAAAGTGGTCACTGAGACTGAACAAGAGAAAGAGGATCATGCCAGTTCAAATCTTTCTCAACCTAAAGTGAACCTTGGGGTGACAATGTTGGCTTCCAGGTTTGCTGCAAACACAAGGAGAGGGGCTCAGAAGATCAAAGGTGTTGGTATGTCTAAGTTACAGAAGCCTGAAGAACCTGACTTCACTGAGCCTGATGATGATTAG 963 0.4652 MQTYLQSITVRLEEWRLKRRDTEEWMRHRQLPEDLRQLVRRFVQYKWVATRGVDEEAILRGLPADLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLTSSLSTEGTYIVREGDPVTEMLFIIRGRLESSTTNGGRTGFFNSITLRPGDFCGEELLEWALLRKSTLNLPSSTRTVRTLVEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKRRLMARDLTVMEFFSWDEKVVTETEQEKEDHASSNLSQPKVNLGVTMLASRFAANTRRGAQKIKGVGMSKLQKPEEPDFTEPDDD* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0964 320 CDD CAP_ED 84 215 IPR000595 -
Vvi11g0964 320 ProSiteProfiles cAMP/cGMP binding motif profile. 84 168 IPR000595 -
Vvi11g0964 320 Gene3D Jelly Rolls 82 202 IPR014710 -
Vvi11g0964 320 FunFam Cyclic nucleotide-gated ion channel 1 82 200 - -
Vvi11g0964 320 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 314 - -
Vvi11g0964 320 Pfam Cyclic nucleotide-binding domain 107 195 IPR000595 -
Vvi11g0964 320 Gene3D Helix hairpin bin 12 75 - -
Vvi11g0964 320 FunFam Cyclic nucleotide-gated ion channel 1 11 75 - -
Vvi11g0964 320 SMART cnmp_10 84 215 IPR000595 -
Vvi11g0964 320 MobiDBLite consensus disorder prediction 295 320 - -
Vvi11g0964 320 SUPERFAMILY cAMP-binding domain-like 14 206 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0964 Vvi-Chr11 14917704 14928654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0964 1 320 Ion Channels AT4G30360 78.328 1.39e-177 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0964 K05391 - vvi:100250129 612.838