Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0963 ATGGTAGATGTTCATCATACTATTGGTCTCGTTGCCTTTGCTGTTGATTTTGAGATTGTCATCTGGTTCATTATACCAGCTACGAGAAGCCCACAAACTGATCATAACAACAATGCCCTTGCGCTGATTGTTCTGCTCCAATATGTTCCCAGATTATATCTGATTTTTCCATTAAGTTCTCAAATTATTAAAGCAACTGGAGTGGTCACCAAGACTGCTTGGGCAGGGGCTGCATATAATCTGCTATTATACATGTTGGCAAGCCATGTATTAGGGGCAGCATGGTATTTGCTGTCAATTGACCGGTATATGGCATGCTGGAAATCAGTCTGCAGAAAGGAAACTGGGCCTACAAAATGTTTTCTTAATTATTTAGATTGTGATGCTTTCAACCATGATAATCGCAAATCTTGGGCAAATAGTACAAATGTATTTAAGAGCTGTTATCCTGAAAATGATATCACTTTTAAGTATGGCATATTTGAAAATGCAGTGACAAAGAGTGTTGTCTCCTCGAACTTCCTAGAGAAGTACTTCTATTGTTTGTGGTGGGGCTTACAAAACCTAAGATTTTGTCTACCATTCATGAAGAGTTCAAGGTAG 603 0.3864 MVDVHHTIGLVAFAVDFEIVIWFIIPATRSPQTDHNNNALALIVLLQYVPRLYLIFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGAAWYLLSIDRYMACWKSVCRKETGPTKCFLNYLDCDAFNHDNRKSWANSTNVFKSCYPENDITFKYGIFENAVTKSVVSSNFLEKYFYCLWWGLQNLRFCLPFMKSSR* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0963 200 SUPERFAMILY Voltage-gated potassium channels 13 188 - -
Vvi11g0963 200 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 21 189 - -
Vvi11g0963 200 Pfam Ion transport protein 13 189 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0963 Vvi-Chr11 14880926 14888671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0963 8 189 Ion Channels AT4G30360 68.681 9.04e-83 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0963 K05391 - vvi:100250129 363.999