Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0961 ATGGAGTTGAAGAAGGAGAAGATAGTGAGGTTTTATTCTGATGAAAATCAACATCAAGAATGGGGGAAAAATGATCCATTACTCCTAGGAAAGTCATCTTCTATAGACAAGGTTTCATCTTCCTTCTTGAAACCACATAATGCGGTCAGGAGCAGAAATAAGATACCTGAAACCCTTAAATTTGGGAGGTCCAAGGTGTTTCCAGAAGACCATGAGCCATGGCGCAAGCAAATACTTGACCCAGGTAGTGAGCTAGTCTTACAATGGAGTCGAGTCTTCATTGTCTCGTGCTTGGTGGCACTTTTTGTTGATCCATTGTATTTTTATTTGCCTGCTGTGGGAGGGAATGAGGGCTCTTGGTGTATCAAGACAGACTTGAATTTGCGAATTGTGGTTACATGTTTTCGGACTATTGCCGATTTTTTCTATCTGTTGCACATGATTATAAAGTTCAGGACAGCTTATGTTGCCCCAAGCTCTCGGGTGTTTGGGAGGGGTGAACTTGTGATGGATCCCAAGAAAATCGCCCAGAGGTATATTAGGTCTGATTTCTTCATTGATTTGGTTGCAACATTGCCTCTCCCTCAGGTAATCATTTTGAAGTATCAAATTTCCATTTGGAAGTATCATTTTTCAACTGTTTACACATTGCTCTGTGTATGTGTGTGTGTTATAATTGAAAATACAGTCATGCCACATATAAGTCTGTTAAATTTGGTCACTACAGAAACTAAATTTGAGGCTAAATTAACTTATATTTGA 762 0.3937 MELKKEKIVRFYSDENQHQEWGKNDPLLLGKSSSIDKVSSSFLKPHNAVRSRNKIPETLKFGRSKVFPEDHEPWRKQILDPGSELVLQWSRVFIVSCLVALFVDPLYFYLPAVGGNEGSWCIKTDLNLRIVVTCFRTIADFFYLLHMIIKFRTAYVAPSSRVFGRGELVMDPKKIAQRYIRSDFFIDLVATLPLPQVIILKYQISIWKYHFSTVYTLLCVCVCVIIENTVMPHISLLNLVTTETKFEAKLTYI* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0961 253 Pfam Ion transport protein 89 205 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Vvi11g0961 253 SUPERFAMILY Voltage-gated potassium channels 85 226 - -
Vvi11g0961 253 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 63 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0961 Vvi-Chr11 14858692 14860132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0961 1 199 Ion Channels AT4G30360 53.695 7.96e-65 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0961 K05391 - vvi:100250129 402.134