Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0950 ATGGGCACGGATGTTTACATTTTTTTAAAAAGAACAGTGAAAACGTGTTTGACTCTAATTCCTATTCAGGGCCTAAACATGATATACATAGATGCGCCAGTTGGCACCGGCTTCTCTTATTCAAATACCTCGCAAGGCTACTATGTTGATGACGCTGAAAATGCTGCTCAGACATACGAGTTTTTAAGAAAGTGGCTGGTGCAACACCCTGATTTTCTGGGGAATGAACTCTACATTGCTGGTGTTTCATATTCGGGCATACCTGTTCCTATGATCGTTAACGAGATAATTGAGGGTAACATACTTGGACTCAGCCCAGGCATGAACATCAAGGGTTACGTGCTTGGAAGCCCTGTTACGGATTCATTTATTGATGATAATTCAAAGATCCCGTTTGCTCACGGGCTATCACTTATATCACATGAACTCTATAATTCTGCGAAGACAAATTGCGAAGGAAATTATGTGAATGTAAGCAGTGAAGCGTGTGCATTGGATATTGAAGCCATCGATGAGTTGCTGCGCTATATAAATGTAGCACAAGTTCTGCATCCTTACTGTTATCCTTTCACCGTAAAGCCAAGCGAGAGACAAGGGAATCGAAGATCATCTTTGGAAGAGGCCAATTATCGTTCATGTGACTTGTATTCAAGCGTACCCATAAGCATCTGGGCAAATGATGAATCTGTCCGGGCCGCTCTTAATGTTAGAAATGGAACAAAAGGAAATTGGCAGCCTTGCAATTCAAGCTTAACAGGGTACACCGAGGATGTTACAACAACTCTTGCATATCATAGAAATTTCAGTCATACAAGTAGTTTACGAGCTTTGATATATAGCGGTGATCATGATATGTCGATTCCGAATATTGGTACCCAAGAATGGATTAGGTCTCTCAATATGACTCTAGCCGATACCTGGCGAGGTTGGATGGTTGATGCCCAAGTTGCAGGATATACGAAGAGGTATACCTACGGAGATTTCAGTTTAACGTATGCAACAGTGAAGGGAGCAGGTCACATACCTGCAACTTACAAAACTAGACAGTGTTATGAGATGATAGAAAGGTGGCTCGCTCATTACCCTCTCTAA 1092 0.4194 MGTDVYIFLKRTVKTCLTLIPIQGLNMIYIDAPVGTGFSYSNTSQGYYVDDAENAAQTYEFLRKWLVQHPDFLGNELYIAGVSYSGIPVPMIVNEIIEGNILGLSPGMNIKGYVLGSPVTDSFIDDNSKIPFAHGLSLISHELYNSAKTNCEGNYVNVSSEACALDIEAIDELLRYINVAQVLHPYCYPFTVKPSERQGNRRSSLEEANYRSCDLYSSVPISIWANDESVRAALNVRNGTKGNWQPCNSSLTGYTEDVTTTLAYHRNFSHTSSLRALIYSGDHDMSIPNIGTQEWIRSLNMTLADTWRGWMVDAQVAGYTKRYTYGDFSLTYATVKGAGHIPATYKTRQCYEMIERWLAHYPL* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0950 363 PRINTS Carboxypeptidase C serine protease (S10) family signature 330 343 IPR001563 GO:0004185|GO:0006508
Vvi11g0950 363 PRINTS Carboxypeptidase C serine protease (S10) family signature 30 40 IPR001563 GO:0004185|GO:0006508
Vvi11g0950 363 PRINTS Carboxypeptidase C serine protease (S10) family signature 65 90 IPR001563 GO:0004185|GO:0006508
Vvi11g0950 363 FunFam Carboxypeptidase 213 363 - -
Vvi11g0950 363 Pfam Serine carboxypeptidase 26 359 IPR001563 GO:0004185|GO:0006508
Vvi11g0950 363 Gene3D alpha/beta hydrolase 22 362 IPR029058 -
Vvi11g0950 363 SUPERFAMILY alpha/beta-Hydrolases 25 362 IPR029058 -
Vvi11g0950 363 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 343 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0950 Vvi-Chr11 14747772 14749853 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0950 224 363 Calmodulin-binding Proteins AT2G22960 47.143 4.53e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0950 K16296 - vvi:100267207 707.983