Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0947 ATGAGAAATCGAGGGTCTTTCTTTGGTAAGAAATTAAAGTATCACGTGTCTATTCCAATACACCAAGAAAGAGGTAATCAAAGCAAATGGTTCAGAGAAAAGGATCAACTAGGCGAAGATGCAGAAGAGCTTGTCCACGTCCCTCTTCAGGCCATTCTCTTGGCGGACAGCTTCGCCCAGAAGTTCCGCCCCATCACCCTTGAACGCCCCAAAGTACTGCTGCCATTGGTGAATGTTCCCATGATAGACTACACTTTAGCGTGGCTTGAGTCTACTGGGATTGAGGAGTTTTTTGTCTTTTGCTGTGTGCATTCGAAACAGGTTATCAACTATTTGGAGAATTCCCATTGGTTTTCTTTGCCACACTTTGATGTCACCACAATAGAGTCACACAATTCTGTCAGTGCCGGTGATGCGCTGCGTCTGATTTTCGAGCGGCATGTGATACATGAAGACTTCGTCCTTATTACTGGAGATACAGTAAGCAACATGTCACTTACACAGGAACTTCAAGAGCATAAGGATAGAAGGGAGAAGGATAATAATGCTGTAATGACTATGGTTATTAAACGGTCAAAGCCTTCTCCGATTACTCATCAATCTCAACTTGGTACTGATGAGCTGCTATGGCAATTGATCCTTACACAAAGCAACTTCTAG 660 0.4348 MRNRGSFFGKKLKYHVSIPIHQERGNQSKWFREKDQLGEDAEELVHVPLQAILLADSFAQKFRPITLERPKVLLPLVNVPMIDYTLAWLESTGIEEFFVFCCVHSKQVINYLENSHWFSLPHFDVTTIESHNSVSAGDALRLIFERHVIHEDFVLITGDTVSNMSLTQELQEHKDRREKDNNAVMTMVIKRSKPSPITHQSQLGTDELLWQLILTQSNF* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0947 219 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 36 211 - -
Vvi11g0947 219 SUPERFAMILY Nucleotide-diphospho-sugar transferases 47 206 IPR029044 -
Vvi11g0947 219 Coils Coil 163 183 - -
Vvi11g0947 219 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 37 207 IPR029044 -
Vvi11g0947 219 FunFam Uncharacterized protein 35 209 - -
Vvi11g0947 219 Pfam Nucleotidyl transferase 51 193 IPR005835 GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0947 Vvi-Chr11 14646201 14648978 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0947 36 209 Eukaryotic Initiation Factors Gene Family AT2G34970 66.854 6.48e-78 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0947 K03240 - vri:117924724 374.785