Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0941 ATGCGTACAGCAAGCGTGCAACAATTAATTACTCAGGAAAAAAAAAAAGGAAAAAGGAAGTGCCTCATGGTCTCTTTTGATCTCCTATATAGCAACCTAATCTTCTGCTTATTATTCAGTGCCATTGCTTCCATTCAGATGATCATGCAGCAAAGCGACATGGAGCTCTTGCTCCTCTCCTTTCTCCTCCTCATGGCTCTCTCTCTCTCTTTTTGGATTCGCTTCTTTGTCCATAAACTCGAAAAAAGCAGTGGTATTAACCTGCCTCCAGGGAAAATGGGTTTTCCATTCATTGGTGAAAGTCTAGAATTCCTTCGGATGGGCAGGAAGGGAACCCCTGAAAGGTTCATTCAAGATAGGATGGCCAAATACTCAACCCAGATCTTCAAAACTTGCTTACTCGGAGAACCAACTGCAGTTGTGTGTGGGGCTGCTGGAAACAAGTTGTTGTTCTCCAACGAGAACAAGCTTGTTACTTCATGGTGGCCGCGCTCTGTGGAGAAGATATTTCCCTCTTCTCTTCAGACTTCGACCAAAGAAGAGTCCATGAAAACTCGTAAGTTGCTTCCAGCCTTTCTCAAACCCGAGGCGTTGCAAAAGTATGTGGGGATCATGGATTCCATAGCGAAGTGGCATTTGGATAACCACTGGGACTTGAATGAAACCGTTACTGTTTTCCCTCTTGCCAAGCAATACACCTTCATGGTGGCTTGTAGATTGTTCTTGAGCATAGATGACCCTAAGCACATTGCAAAATTCGCTAACCCATTTCATATTTTGGCTGCTGGGGTCATGTCAATACCTATAAACTTCCCTGGGACCCCATTCAACCGTGCTATCAAGGCTGCGGATTCCGTAAGAAAGGAGCTCAGAGCAATAATCAAGCAAAGGAAAATTCAAGTTTTAGCGGGGAAAAGTTCATCCTCTAAGCATGATATACTGTCCCATATGCTCACCACAACAGATGAGAATGGACAGTTCTTGAATGAGATGGACATTGCGGATAAGATACTTGGTTTGCTAATTGGTGGCCATGACACTGCAAGTGCTGTCATAACTTTCATCATCAAGTATCTTGCAGAGTTGCCACAAGTCTACAATGAGGTTTTAAAGGAGCAAATGGAGGTTGCAGCCGGGAAGAAAAGTGGAGAGATGCTTGATTGGGAGGACATACAAAAGATGAAGTATTCATGGAATGTGGCAAATGAAGTAATGAGGCTGGCACCACCACTTCAAGGTAGTTTCCGAGAGGCCATAACTGACTTCACCTATGCTGGTTTCTCCATTCCCAAAGGGTGGAAGTTGTACTGGAGCACAAATGCAACACACAAGAACCCTGACTACTTCCCTGATCCGGAGAAATTTGATCCTTCAAGGTTTGAAGGAAATGGACCCATTCCTTACACCTATGTTCCTTTCGGAGGAGGACCACGAATGTGCCCTGGGAAAGAGTATGCTCGTTTGGAAATACTTGTTTTCATACACAATGTTGTGAGACGGTTCAGTTGGTATAAACTGCATCCAAATGAAGATGTCATAGTGGATCCAATGCCAATGCCTGCAAAAGGACTTCCCATTCGCCTTCGTCACCATTAA 1596 0.4424 MRTASVQQLITQEKKKGKRKCLMVSFDLLYSNLIFCLLFSAIASIQMIMQQSDMELLLLSFLLLMALSLSFWIRFFVHKLEKSSGINLPPGKMGFPFIGESLEFLRMGRKGTPERFIQDRMAKYSTQIFKTCLLGEPTAVVCGAAGNKLLFSNENKLVTSWWPRSVEKIFPSSLQTSTKEESMKTRKLLPAFLKPEALQKYVGIMDSIAKWHLDNHWDLNETVTVFPLAKQYTFMVACRLFLSIDDPKHIAKFANPFHILAAGVMSIPINFPGTPFNRAIKAADSVRKELRAIIKQRKIQVLAGKSSSSKHDILSHMLTTTDENGQFLNEMDIADKILGLLIGGHDTASAVITFIIKYLAELPQVYNEVLKEQMEVAAGKKSGEMLDWEDIQKMKYSWNVANEVMRLAPPLQGSFREAITDFTYAGFSIPKGWKLYWSTNATHKNPDYFPDPEKFDPSRFEGNGPIPYTYVPFGGGPRMCPGKEYARLEILVFIHNVVRRFSWYKLHPNEDVIVDPMPMPAKGLPIRLRHH* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0941 531 SUPERFAMILY Cytochrome P450 85 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0941 531 Gene3D Cytochrome P450 77 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0941 531 FunFam Taxadiene 5-alpha hydroxylase 79 531 - -
Vvi11g0941 531 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0941 531 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0941 531 PRINTS E-class P450 group I signature 352 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0941 531 PRINTS E-class P450 group I signature 332 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0941 531 PRINTS E-class P450 group I signature 438 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0941 531 PANTHER CYTOCHROME P450 26 85 520 - -
Vvi11g0941 531 CDD CYP90-like 120 528 - -
Vvi11g0941 531 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0941 531 PRINTS P450 superfamily signature 399 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0941 531 PRINTS P450 superfamily signature 480 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0941 531 PRINTS P450 superfamily signature 343 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0941 531 Pfam Cytochrome P450 89 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0941 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0941 Vvi-Chr11 14524510 14526554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0941 87 435 Cytochrome P450 AT5G36110 58.239 1.35e-141 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0941 K20667 - vvi:100265713 1063.91