Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi11g0918 | ATGTCAAGAACGGGGTATGGAGAAAAGAAGGTAGAGGTGGCAGTGGCAATAGATAAGGACAAAGGGAGTCAATATGCTCTTAAATGGGCTGTTGATCATCTTCTCAGCAAGGGCCAATCTGTAACACTCCTTCATATTAAACAAAAAGCATCTTCCATTCCCAACCCATTGGGGAATCAGGTCGCCATTTCCGATGTCAATGAAGATGTTGCAAGAGCTTACAAGCAGCAACTTGATAATCAGGCCAGGGAGTTGTTTCTTCCATTCCGATGCTTTTGTATGCGCAAGGATATTCAATGTAACGAAGTCATACTGGAAGGCACAGATATAACAAAAGCAATAATCGACTTTGTTACTGCCTCCTCAATTGAGATTTTAGTTGTTGGTGCCCCATCAAGGAGTGGATTTATCAGAAGATTCAAGACCACAGATGTACCAAGCAGTGTCTTGAAAGCAGCACCAGACTTTTGCACTGTGTATGTCATCTCTAAAGGAAAGATCACATCAGTGCGATCTGCCACACGTCCTGTACCGAATCCCTCTCCTCCCCCAACTGCATCTTCTCTCCATCAAAACCAAGCTAGCCCTACTCCTGATCCAACTGAAGCACATCTTAAACATAATCGCAGCACAAGAGCCTCTGAGAGGTCATCATTTGGACTCCGCAACTTGAACGACCTTGAAATCAAGTCACCCTTCACTAGAGGTAGAGCCTCACTAAGTAAATCTTATGGGGAGCTCTCAGTGCCAGAAACTGATATATCATTTGTAAGCTCAGGAAGGCCAAGCATCGATCACATTTTCCCGTTTTCAAGCTTTGCATCATCAGGAGGCAGGTCATCTGAGCTGAACTATTCACTTGACCTTTCATCATCCTCCAATGAAAGTGGGAGATTGTCATGGGCATCACAAAGCATGGAAGATGTGGAAGCTGAGATGAGGAGGCTCAAGCTTGAGCTCAAGCAAACAATGGACATGTACAGTACAGCTTGCAAGGAAGCACTGTCAGCAAAACAGACGGCAAGGGAACTCCATCGCTGGAAAATGGAAGAAGCACAGAGATTAGGAGAGGCAAGGCTAGCTGAGGAAGCTGCATTAGCAACTGCAGAGAGAGAGAAAGCAAAGGCTAAGGCAGCCCTTGAGGCAGCTGAAGCATCTCAGAGGATTGCTAAACTGGAAGCACAAAAGCGAATTAATGCAGAAATGGTAGCAATAAAAGAAGCAGAGGAAAGAAAGAAGATGCTAAATACTCTGGCACAAACTGATCTCAGGTACAGGAAATACACCATTGAGGAGATTGAAGCAGCAACTGAGTTATTTTCAGAGTCTCGGAAGATTGGGGAAGGAGGTTATGGCCCTGTATACAAGAGTTATTTGGATCATACACCAGTTGCAATAAAGGTTCTTCGTCCAGATGCAGCTCAAGGAAGGTCACAGTTTCAGCAGGAGGTTGAAGTACTAAGCTGCATACGGCATCCCAATATGGTTCTCCTCCTTGGGGCCTGTCCAGAGTATGGTTGCCTAGTCTATGAGTATATGGCTAATGGGAGCTTAGATGACCATCTCTTCCGGCGAGGGAACACCCCAGTTCTTCCATGGCAACTAAGATTCCAGATTGCGGCAGAGATAGGCACAGGTCTTCTTTTCCTCCACCAGACCAAGCCAGAACCATTAGTGCATCGTGACCTAAAACCTGGCAACATTTTGCTTGACCGTAACTTTGTCAGCAAGATCAGTGATGTTGGCTTGGCCAGGCTTGTCCCTCCATCTGTGGCCGACAGTGTAACACAGTATCTCATGACATCAACAGCCGGGACTTTCTGTTACATTGACCCAGAGTATCAGCAAACCGGAATGCTTGGAATAAAATCGGATATTTACTCACTCGGGATTATGCTTCTGCAAATAATTACTGCCAAACCCCCAATGGGTTTGACTCATTATGTGGAACGGGCTATTGAGAAGGGGACTTTTGCGGAGGTGCTTGACCCAGCTGTTCATGATTGGCCAGTTGAAGAGGCCTTGAAGTTTGCCAAATTAGCTCTTCAGTGCGCAGAGCTGAGACGGAAAGACAGACCAGATCTTGGGAATGTTGTCTTACCTGAGCTTAACAGATTGAGAACACTAGCAGAAGAAAACATGTCCAGCATAATGTTAGACAGCACTACAGTAGCCTCCCCAAGAAAAAGCAATGTTTCCATAGCACATACCTTACGTATAGAGTAG | 2226 | 0.4555 | MSRTGYGEKKVEVAVAIDKDKGSQYALKWAVDHLLSKGQSVTLLHIKQKASSIPNPLGNQVAISDVNEDVARAYKQQLDNQARELFLPFRCFCMRKDIQCNEVILEGTDITKAIIDFVTASSIEILVVGAPSRSGFIRRFKTTDVPSSVLKAAPDFCTVYVISKGKITSVRSATRPVPNPSPPPTASSLHQNQASPTPDPTEAHLKHNRSTRASERSSFGLRNLNDLEIKSPFTRGRASLSKSYGELSVPETDISFVSSGRPSIDHIFPFSSFASSGGRSSELNYSLDLSSSSNESGRLSWASQSMEDVEAEMRRLKLELKQTMDMYSTACKEALSAKQTARELHRWKMEEAQRLGEARLAEEAALATAEREKAKAKAALEAAEASQRIAKLEAQKRINAEMVAIKEAEERKKMLNTLAQTDLRYRKYTIEEIEAATELFSESRKIGEGGYGPVYKSYLDHTPVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDHLFRRGNTPVLPWQLRFQIAAEIGTGLLFLHQTKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVADSVTQYLMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQIITAKPPMGLTHYVERAIEKGTFAEVLDPAVHDWPVEEALKFAKLALQCAELRRKDRPDLGNVVLPELNRLRTLAEENMSSIMLDSTTVASPRKSNVSIAHTLRIE* | 742 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi11g0918 | 741 | Gene3D | HUPs | 12 | 164 | IPR014729 | - | |
Vvi11g0918 | 741 | Gene3D | Phosphorylase Kinase; domain 1 | 417 | 512 | - | - | |
Vvi11g0918 | 741 | FunFam | U-box domain-containing protein 51 | 513 | 713 | - | - | |
Vvi11g0918 | 741 | Coils | Coil | 357 | 411 | - | - | |
Vvi11g0918 | 741 | Pfam | Protein kinase domain | 441 | 694 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11g0918 | 741 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 13 | 162 | - | - | |
Vvi11g0918 | 741 | MobiDBLite | consensus disorder prediction | 171 | 218 | - | - | |
Vvi11g0918 | 741 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 558 | 570 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi11g0918 | 741 | Pfam | Universal stress protein family | 13 | 154 | IPR006016 | - | |
Vvi11g0918 | 741 | SMART | serkin_6 | 440 | 700 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11g0918 | 741 | PANTHER | OS02G0152300 PROTEIN | 12 | 722 | - | - | |
Vvi11g0918 | 741 | SUPERFAMILY | Protein kinase-like (PK-like) | 423 | 699 | IPR011009 | - | |
Vvi11g0918 | 741 | CDD | STK_N | 13 | 165 | - | - | |
Vvi11g0918 | 741 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 412 | 512 | - | - | |
Vvi11g0918 | 741 | Coils | Coil | 299 | 326 | - | - | |
Vvi11g0918 | 741 | ProSiteProfiles | Protein kinase domain profile. | 440 | 703 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11g0918 | 741 | Gene3D | Transferase(Phosphotransferase) domain 1 | 513 | 726 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi11g0918 | Vvi-Chr11 | 14179779 | 14186973 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi11g0918 | 4 | 734 | Receptor kinase-like Gene Family | AT1G78940 | 56.901 | 0.0 | 800 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IXb | Vvi11g0918 | Pkinase | 9.3e-40 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi11g0918 | - | - | vvi:100262028 | 1301.96 |