Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0914 ATGGCCCATCTTCTCAATAAGCCCTTATTTTTCACTCTTGTTACAATCATTCTCCTCTCATCCACTAGGTTGTTGGCCTCCTACTTGCCCATTTCTCCCAATATAGCACGTTTTCTCCCTTTGGCTCCTCTAATTCTGTACCTTTTCTACTCAATTTCCAAGCGCTCCGCCTCCCTCCCTCCAGGGCCTCTCTCCATACCCATATTTGGCAATTGGCTCCAAGTTGGGAATGACCTGAATCACCAGCTATTGGCCTCCATGGCACAGAAGTATGGTCCGGTCTTCCTACTGAAACTTGGGTCAAAAAACTTGACAGTGGTGTCGGATCCCGAGCTGGCTAGCCAGGTGCTGCACACACAAGGTGTGGAGTTTGGATCCCGGCCGCGGAATGTGGTGTTTGATATCTTCACGGGGAACGGGCAGGACATGGTGTTCACCGTCTACGGCGACCACTGGCGGAAAATGCGTCGGATTATGACTCTTCCATTCTTCACTAACAAGGTGGTGCACCAATACAGTGAAATGTGGGAGGAGGAAATGGATCTAGTGGTCGATGACCTGAGGAACAAGGAGAGTGTGAAGACTGAAGGCCTGGTTATCAGGAAGCGTCTGCAGTTGATGCTGTACAATATCATGTACCGGATGATGTTCGATGCCAAGTTTGAGTCTCAAGAGGATCCGCTGTTCATCCAGGCCACGCGGTTTAACTCTGAAAGAAGCCGGTTGGCCCAGAGTTTTGATTACAACTATGGAGACTTCATTCCTCTGCTTAGGCCATTTTTGAGAGGTTACTTGAACAAGTGCAGGGAGCTGCAAAGCAGTAGGCTTGCATTTTTCAACAATTACTATGTTGAGAAAAGAAGGGAAATAATGGCTGCTAATGGAGAGAAACACAAGATCAGGTGTGCCATTGATCACATAATAGATGCTCAACACAAGGGAGAAATCAGTGAAGAAAATGTGCTCTACATTGTGGAGAACATAAATGTTGCAGCTATAGAGACTACTCTGTGGTCCATGGAATGGGCCATTGCTGAACTGGTTAACCATCCACATGTCCAATCCAAGATTCGGGATGAAATCACCACCGTCCTCCAGGGGGGTGCAGTCACTGAATCCAACCTCCACCAACTTCCATACCTACAGGCCACAGTGAAAGAGACCCTCAGGTTACACTCACCAATTCCCCTCCTCGTACCCCATATGAACCTTGAAGAAGCTAAGCTAGGCGGTTATACCATCCCTAAAGAGTCCAAGGTGGTGGTTAATGCCTGGTGGCTGGCCAACAACCCCGAATGGTGGAAGAATCCTGAGGAGTTCCGCCCAGAGCGCTTCCTGCAAGAGGAGTCTGCCACAGACGCTGTAGCAGGTGGGAAGGCCGATTTTCGCTTCTTGCCATTTGGGGTGGGTAGGCGGAGTTGCCCTGGGATCATACTCGCGCTCCCCATCCTAGCCCTTGTGATCGGCAAAATGGTCATGAACTTTGAAATGAGGCCTCCAATTGGGGTGGAGAAGATTGACGTGTCCGAAAAAGGAGGCCAGTTTAGCCTGCACATCGCCAACCATTCTACAGTCGCGTTCACTCCAATCACCGCATAG 1599 0.4953 MAHLLNKPLFFTLVTIILLSSTRLLASYLPISPNIARFLPLAPLILYLFYSISKRSASLPPGPLSIPIFGNWLQVGNDLNHQLLASMAQKYGPVFLLKLGSKNLTVVSDPELASQVLHTQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHQYSEMWEEEMDLVVDDLRNKESVKTEGLVIRKRLQLMLYNIMYRMMFDAKFESQEDPLFIQATRFNSERSRLAQSFDYNYGDFIPLLRPFLRGYLNKCRELQSSRLAFFNNYYVEKRREIMAANGEKHKIRCAIDHIIDAQHKGEISEENVLYIVENINVAAIETTLWSMEWAIAELVNHPHVQSKIRDEITTVLQGGAVTESNLHQLPYLQATVKETLRLHSPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPEWWKNPEEFRPERFLQEESATDAVAGGKADFRFLPFGVGRRSCPGIILALPILALVIGKMVMNFEMRPPIGVEKIDVSEKGGQFSLHIANHSTVAFTPITA* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0914 532 FunFam Trans-cinnamate 4-monooxygenase 50 524 - -
Vvi11g0914 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Vvi11g0914 532 PRINTS E-class P450 group I signature 112 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0914 532 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0914 532 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0914 532 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0914 532 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0914 532 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0914 532 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0914 532 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0914 532 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0914 532 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 38 530 - -
Vvi11g0914 532 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0914 532 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0914 532 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0914 532 Pfam Cytochrome P450 60 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0914 532 SUPERFAMILY Cytochrome P450 60 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0914 532 Gene3D Cytochrome P450 51 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0914 Vvi-Chr11 14090460 14092179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0914 69 529 Monolignol Biosynthesis Gene Families AT2G30490 66.091 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0914 K00487 - vvi:100267215 1066.6