Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0886 ATGCTCTTGGATCTTCTTAGAGTTGTCAACCATCATCAAGCTTGCCTTGCAATACCTATTCGTACGGTTCAGAAAGAATACAACATGGCTAACATTGAAATGGAAAATATTCCATTTGCTGACGATAATATACAACAAGGTGTCAATCCATATCAATCTTCTGACAAGGACAATCTGCTTGTGCTCAAATCCAACTCTTCCATTCCATCAAGAGGTGTTACATATTTTACTTCAACCGTCAAGAAATTGGCAACCCAGAATTCTAGCATATGGAAGTTTGATAGAAATGGCACTGCTGATATCAATGTTGGCTCAAGCAAAAGTTTACATGTTTTGGCTAGCTCTCACAATAGTAGACAATGGGGTGGGTTCACTAATGGGGTCCTCCTTAAGAGATATCCAACACAATGA 411 0.3893 MLLDLLRVVNHHQACLAIPIRTVQKEYNMANIEMENIPFADDNIQQGVNPYQSSDKDNLLVLKSNSSIPSRGVTYFTSTVKKLATQNSSIWKFDRNGTADINVGSSKSLHVLASSHNSRQWGGFTNGVLLKRYPTQ* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0886 136 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 37 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0886 Vvi-Chr11 13073391 13073801 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0886 1 41 Mechanosensitive Ion Channel Family AT5G10490 53.659 1.69e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0886 - - vri:117912690 131.339