Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0877 ATGGCTTCTGCCGTCAAGAGTGTCGAAAAGATCCGCCAAATCGTGCGTTTGAAGCAGGTAATGCAGCGATGGAAGACCATGAGTGTGAGTCTCAGACCGCGGTCCATACGCTCCTTCTCCGACTCCGATTCCGACTGCACCTCCGGGTCGATCCGGCGCACCCCCTCCGGGTTCCTGGCCGTCTATGTAGGCGCGGACCGCCGGCGGTTCGTGATCCCAACCCGGCTCCTGAACCTGCCGATCTTCGTGGCTCTGTTGAACAAGGCGGAGGAGGAGTTCGGGCTTCGATCGAGCGGAGGCCTGGTTTTACCCTGTGAAGTGGGGTTTTTCAAAGAAGTACTAAGGTTTTTGGAGAAGGATGAGGCGAAATACGGTGGGTTGGGGTTGGATGAGTTTGTGAAGATGGTTTCCGAAGTGGGTTTTGATTCCTGTAGAGAGACAAGGAATGTGGTGAATGGGTTTACTCCTCTCCTGCAGAAAGCTAGGGTTTGA 492 0.5508 MASAVKSVEKIRQIVRLKQVMQRWKTMSVSLRPRSIRSFSDSDSDCTSGSIRRTPSGFLAVYVGADRRRFVIPTRLLNLPIFVALLNKAEEEFGLRSSGGLVLPCEVGFFKEVLRFLEKDEAKYGGLGLDEFVKMVSEVGFDSCRETRNVVNGFTPLLQKARV* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0877 163 Pfam Auxin responsive protein 16 117 IPR003676 GO:0009733
Vvi11g0877 163 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 35 113 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0877 Vvi-Chr11 12633888 12634379 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0877 11 118 Calmodulin-binding Proteins AT3G43120 39.394 1.50e-25 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0877 K14488 - vvi:100266954 311.612