Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi11g0877 | ATGGCTTCTGCCGTCAAGAGTGTCGAAAAGATCCGCCAAATCGTGCGTTTGAAGCAGGTAATGCAGCGATGGAAGACCATGAGTGTGAGTCTCAGACCGCGGTCCATACGCTCCTTCTCCGACTCCGATTCCGACTGCACCTCCGGGTCGATCCGGCGCACCCCCTCCGGGTTCCTGGCCGTCTATGTAGGCGCGGACCGCCGGCGGTTCGTGATCCCAACCCGGCTCCTGAACCTGCCGATCTTCGTGGCTCTGTTGAACAAGGCGGAGGAGGAGTTCGGGCTTCGATCGAGCGGAGGCCTGGTTTTACCCTGTGAAGTGGGGTTTTTCAAAGAAGTACTAAGGTTTTTGGAGAAGGATGAGGCGAAATACGGTGGGTTGGGGTTGGATGAGTTTGTGAAGATGGTTTCCGAAGTGGGTTTTGATTCCTGTAGAGAGACAAGGAATGTGGTGAATGGGTTTACTCCTCTCCTGCAGAAAGCTAGGGTTTGA | 492 | 0.5508 | MASAVKSVEKIRQIVRLKQVMQRWKTMSVSLRPRSIRSFSDSDSDCTSGSIRRTPSGFLAVYVGADRRRFVIPTRLLNLPIFVALLNKAEEEFGLRSSGGLVLPCEVGFFKEVLRFLEKDEAKYGGLGLDEFVKMVSEVGFDSCRETRNVVNGFTPLLQKARV* | 164 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi11g0877 | 163 | Pfam | Auxin responsive protein | 16 | 117 | IPR003676 | GO:0009733 | |
Vvi11g0877 | 163 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 35 | 113 | IPR003676 | GO:0009733 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi11g0877 | Vvi-Chr11 | 12633888 | 12634379 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi11g0877 | 11 | 118 | Calmodulin-binding Proteins | AT3G43120 | 39.394 | 1.50e-25 | 94.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi11g0877 | K14488 | - | vvi:100266954 | 311.612 |