Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0871 ATGGCCCATCTTCTCAATAAGCCCGTATTTTTCAGTACTCTTCTCACAATCATTCTCCTCTCATCCACTAGGTTGTTGGCCTCCTACTTGTCCATTTCTCCCCCCCTTATAGCTAGTTTTCTCCCTTTGGCTCCTCTAATTCTATACCTTTTCTACTCAATTTCCAAGCGCTCCGCCTCCCTCCCTCCAGGGCCTCTCTCCATACCACTATTTGGCAATTGGCTCCAAGTTGGGAATGACCTGAACCACCAGCTATTGGCCTCCATGGCACAAAAGTATGGTCCGGTTTTCCTACTAAAACTTGGGTCAAAAAACTTGGCAGTGGTGTCGGATCCTGAGTTGGCTAGCCAGGTGCTGCACACACAAGGTGTGGAGTTTGGATCCCGGCCGCGGAATGTGGTGTTTGATATTTTCACGGGGAACGGGCAGGACATGGTGTTCACCGTCTACGGCGACCACTGGCGGAAAATGCGTCGGATTATGACACTTCCATTCTTCACTAACAAGGTGGTGCACCACTACAGTGAAATGTGGGAGGAGGAAATGGAGCTAGTGGTTGATGACCTGAGGAACAAGGAGAGTGTGAAGAGTGAAGGCCTGGTTATCAGGAAGCGTCTGCAGTTGATGCTGTACAATATCATGTACCGGATGATGTTCGATTCCAAGTTTGAGTCTCAAGAGGATCCGCTGTTCATACAGGCAACGCGGTTTAACTCTGAAAGAAGCCGGTTGGCTCAGAGTTTTGATTACAACTATGGAGACTTCATTCCTTTCCTTAGGCCATTTTTGAGAGGTTACTTGAACAAGTGCAGGGAGCTGCAGAGCAGAAGGCTTGCATTTTTCAACAACTACTTTGTTGAGAAAAGAAGGGAAATAATGGCTGCTAATGGAGAGAAGCACAAGATCAGGTGTGCCATTGATCACATAATAGATGCTCAACTCAAGGGAGAAATCAGTGAAGCAAATGTGCTTTACATTGTGGAGAACATAAATGTTGCAGCTATAGAGACCACTCTGTGGTCCATGGAATGGGCCATTGCTGAACTGGTTAACCATCCACATGTCCAATGCAAAATTCGGGATGAAATCACCACCATCCTCCAGGGGGATGCAGTCACTGAATCCAACCTCCACCAACTTCCATACCTACAGGCCACAGTGAAGGAGACCCTCAGGTTACACGCACCAATTCCCCTCCTCGTACCTCATATGAACCTTGAAGAAGCTAAGCTTGGTGGTTATACCATCCCTAAAGAGTCCAAGGTGGTGGTTAATGCCTGGTGGCTGGCCAACAACCCCAGTTGGTGGAAGAATCCTGAGGAGTTCCGCCCAGAGCGCTTCCTGGAAGAGGAGTCTGGCACAGACGCTGTTGCAGGTGGGAAGGTTGATTTTCGCTTCTTGCCATTTGGGGTGGGTAGGAGGAGTTGTCCAGGGATCATACTCGCCCTTCCCATCCTAGCACTTGTGATCGCCAAATTGGTCATGAACTTTGAAATGAGGCCTCCAATCGGGGTGGAGAAGATTGACGTGTCCGAAAAAGGAGGCCAATTTAGCCTGCACATCGCCAACCATTCTACAGTCGCTTTCACTCCAATCGCCGCATAG 1605 0.4879 MAHLLNKPVFFSTLLTIILLSSTRLLASYLSISPPLIASFLPLAPLILYLFYSISKRSASLPPGPLSIPLFGNWLQVGNDLNHQLLASMAQKYGPVFLLKLGSKNLAVVSDPELASQVLHTQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHHYSEMWEEEMELVVDDLRNKESVKSEGLVIRKRLQLMLYNIMYRMMFDSKFESQEDPLFIQATRFNSERSRLAQSFDYNYGDFIPFLRPFLRGYLNKCRELQSRRLAFFNNYFVEKRREIMAANGEKHKIRCAIDHIIDAQLKGEISEANVLYIVENINVAAIETTLWSMEWAIAELVNHPHVQCKIRDEITTILQGDAVTESNLHQLPYLQATVKETLRLHAPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPSWWKNPEEFRPERFLEEESGTDAVAGGKVDFRFLPFGVGRRSCPGIILALPILALVIAKLVMNFEMRPPIGVEKIDVSEKGGQFSLHIANHSTVAFTPIAA* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0871 534 Gene3D Cytochrome P450 53 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0871 534 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 41 533 - -
Vvi11g0871 534 SUPERFAMILY Cytochrome P450 62 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0871 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Vvi11g0871 534 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0871 534 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0871 534 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0871 534 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0871 534 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0871 534 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0871 534 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0871 534 PRINTS E-class P450 group I signature 114 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0871 534 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0871 534 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0871 534 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0871 534 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0871 534 Pfam Cytochrome P450 62 521 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi11g0871 534 FunFam Trans-cinnamate 4-monooxygenase 52 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0871 Vvi-Chr11 12503315 12505043 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0871 71 531 Monolignol Biosynthesis Gene Families AT2G30490 65.443 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0871 K00487 - vvi:100251539 1050.43