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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vvi11g0849
ATGACCTCCACCCAGAAGCCACACTTTTTCAGGATCATACACCCGTCGTTTCTTACACATGGATACCCTGGAATTCCTCAGATTTTTCTAAAAGAATATGGAAACAGTCTCTCAAATTTTGTGTTCCTCCACCTTCCCACTGGCGCTGAATGGCGAGTAGAATTGTTGAAACTCCATGGTGAGGTTTTGTTCGGCAGTGGATGGCAGCGATTTGCTGACTTCTATTCTATAGGATATGGGCATTTCTTACTGTTCAGATACGAAGGCAGTTCCCATTTCCATGTGCTTATATTTGATATGACCGCTTCTGAGATTGAATATCCATACGCTACTACTCCCACTCATGACGACAACCTTCACGAAGTTTCTGTTGGGATTTTGGATGATTTTCCATCCTCCAAAACAACAAATCATATAGACACGATCGATGTTACCACTAGTGAAGTAGTGTTCCACCCTAATGGAGCAAGCAGCTTGCCAAAAGTTGAGGACATTCAGAGTGATTTTCCAACCACCCACAAAACAAGGATGATAACAAAAAACAATCCTTCTTTTAGACCTCATAATGCTTGCAGTTCCCACCTTTATGATTCCTCAATTCCAAATTTTAGGGATGGAGCTCTAGAAAGAGCTAAAGCTTTCAAATCCGAAAATCCTTTCTTCATTGTCACCATGCGACCATCTTATGTTGGTAGTTGGTACGGTTTGGGTATACCAGTGAGTTTTGTCAAGAGGCACTTCAAAAGGGATAACAACAAAACAACCCTTTCTGTTTCAGATGGAAGAACTTGGTCTGTCAAATACATTATGAAAAAATCCAATGTAAAATTCTCCTCTGGTTGGACAAAGTTTGCGAGAGATAACTCTTTGGAAGTAGGTGATGTCTGTGCCTTCGAGCTGATCGAATGCACCGGAACTTCACTCAAGGTTGTCATATTTCGGAACAATGAAGATGCAGGTCATGATCACCTGCAGCAGTGA
981
0.4159
MTSTQKPHFFRIIHPSFLTHGYPGIPQIFLKEYGNSLSNFVFLHLPTGAEWRVELLKLHGEVLFGSGWQRFADFYSIGYGHFLLFRYEGSSHFHVLIFDMTASEIEYPYATTPTHDDNLHEVSVGILDDFPSSKTTNHIDTIDVTTSEVVFHPNGASSLPKVEDIQSDFPTTHKTRMITKNNPSFRPHNACSSHLYDSSIPNFRDGALERAKAFKSENPFFIVTMRPSYVGSWYGLGIPVSFVKRHFKRDNNKTTLSVSDGRTWSVKYIMKKSNVKFSSGWTKFARDNSLEVGDVCAFELIECTGTSLKVVIFRNNEDAGHDHLQQ*
327
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vvi11g0849
326
Gene3D
-
202
318
IPR015300
-
Vvi11g0849
326
Gene3D
-
1
102
IPR015300
-
Vvi11g0849
326
Pfam
B3 DNA binding domain
13
99
IPR003340
GO:0003677
Vvi11g0849
326
Pfam
B3 DNA binding domain
221
315
IPR003340
GO:0003677
Vvi11g0849
326
SMART
B3_2
9
101
IPR003340
GO:0003677
Vvi11g0849
326
SMART
B3_2
221
316
IPR003340
GO:0003677
Vvi11g0849
326
SUPERFAMILY
DNA-binding pseudobarrel domain
3
100
IPR015300
-
Vvi11g0849
326
ProSiteProfiles
B3 DNA-binding domain profile.
221
316
IPR003340
GO:0003677
Vvi11g0849
326
PANTHER
B3 DOMAIN-CONTAINING
3
305
-
-
Vvi11g0849
326
CDD
B3_DNA
219
314
IPR003340
GO:0003677
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vvi11g0849
Vvi-Chr11
10865702
10866963
Dispersed/Proximal
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vvi11g0849
6
322
B3 DNA Binding Superfamily
AT3G18990
30.000
3.58e-39
140
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
B3
Vvi11g0849
B3
3.7e-20
CL0405
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vvi11g0849
-
-
vvi:104880728
681.404
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