Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0839 ATGGAAGTGGGCTCGGGTCAAACCAACTTAATAGGCATCTTTAAGGAGCTAAAGCCAAATGTATTACTAGTGAGAAATTCTCCCAAGTTTATTGTGGAAAGGAGAAACATAGATACCTGGATCGAGATTAGATGTGCAGCAAAGCCAGGATCGACAGTGAACACACTAGAACTTCTAGGTCTTGAAATTCAATATTGCGTTATAAGTTGCTTCAATGATTTTTCAATGCAAGCTTTTTTTCTATTTTTTTTAAATTTTTATACGTATGTTATGGAGGAAGATGTTTGTAGAAGAAAAAGGATAAAAAAGGGTAAATACAATAGCTTTTACAAGCTTGAAGAAATGGATCTCTAA 354 0.3418 MEVGSGQTNLIGIFKELKPNVLLVRNSPKFIVERRNIDTWIEIRCAAKPGSTVNTLELLGLEIQYCVISCFNDFSMQAFFLFFLNFYTYVMEEDVCRRKRIKKGKYNSFYKLEEMDL* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0839 117 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 25 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0839 Vvi-Chr11 10653479 10654096 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0839 20 106 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 46.667 8.97e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0839 - - vvi:104878743 130.183