Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0830 ATGAGGCCGCCTACCTCACTTAAGAAAGAATTCCTCAAGAAATGGATAATGGGTCTTCAATTATGTAGTTCTTCAAAGAAGGAAATGAGCTTTCTGGAGAGAAAGAAGGCCATAAAGCTATCTGCAGATGTGGCCATGGCTTCTGCTAGAAATGCTACAACTCGATGGAGTCGTGCTCTCATTTCCAATGCTTCAAAAGATGACTCTAATAAAGGGCTTGTTGAGTGCATATTAGGTCCTGAGTCTGAGAGCCTAAAGAGAGCTTCGATGAGTTTGGTCTTGTGCAACAAGAGGAATAGAAGCAAGAAGATTTTGAGAAAGAGCTGCAGTATTCGCAGAGCAAGGAAAAGCTCATCTCAAATGGTTATGGCCAGCTCTATTGCAAAGAGGCTGGTGAAGAAAAGAACACAAGTGCTGAAGAGTCTTGTACCTGGTGGGGGATCCATGAGTGAATTCTCTTTGATTGAAGAAACCCTAGATTACATACTTTCTCTTCGAGCTCAGGTTGATGTAATGCGGCATCTAGCTAATGCCACAGAGCTCTTAAATCGTAAATGA 558 0.4247 MRPPTSLKKEFLKKWIMGLQLCSSSKKEMSFLERKKAIKLSADVAMASARNATTRWSRALISNASKDDSNKGLVECILGPESESLKRASMSLVLCNKRNRSKKILRKSCSIRRARKSSSQMVMASSIAKRLVKKRTQVLKSLVPGGGSMSEFSLIEETLDYILSLRAQVDVMRHLANATELLNRK* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0830 185 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 133 177 IPR036638 GO:0046983
Vvi11g0830 185 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 6 178 IPR044660 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0830 1 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 48.913 2.62e-40 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0830 - - vvi:100258663 352.443