Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0783 ATGCTGAGTCTGAAATGGGTCTTTGTTCTTCAAATCTTGTTCACTCTGATCTATCTCAATACACCCGCTTCTTCTTCTGATCCACTTGTTCAGCAACGGTTGGACAAGGTCCAGCACCTACCTGGACAGGCCTTTAATATCTCGTTTGCTCACTATTCTGGGTATGTCACGGTCAATGAGAACTCTGGGAGGGCTCTCTTCTACTGGTTCATTGAGGCTGCTGAAGACCCTTCTTCTAAGCCTCTGGTTCTTTGGCTTAATGGAGGGCCTGGATGTTCATCCATTGCTTATGGGCAGTCAGAGGAAATAGGCCCTTTTCACATTAAAGAAGATGGCAAGACCCTTTATTTGAATCCATACTCTTGGAATCAAGTTGCCAATATTCTATTCCTTGACTCCCCTGTTGGAGTTGGCTTTTCATATTCAAATACTTCTTCAGACGTGTCAACAAATGGAGATATAAGGACTGCTAAGGACTCATTAGCATTTTTGTTAAAGTGGTTTGAGCGTTTTCCGCAGTATAAAGGAAGAGACTTCTACATCACAGGAGAGAGTTATGCAGGGCATTATGTTCCTCAGCTAAGCCAAGCTATTGTAAGGCACAACTCAGCAACTAAGGCAGAATCAATTAATCTAAAGGGTTACATGGTGGGAAATGCTCTGACTGACGATTTCCATGACCACTTGGGGGTTTTCCAGTTTATGTGGTCAGCTGGTATGATTTCTGATCAAACATACAAGCTACTGAATGTGTTCTGTGACTTTCAGCCATTTATACACTCCTCAGCATCATGTGATAAGATTATGGACATTGCAAGTGAAGAAATGGGGAACGTTGACCCATACAGCATTTTTACTCCTCCTTGCAGTGTCAAAGTTGGCTTTTCAAATCAGCTAATGAAAAGATTGATTAGGGTTGGTCGCATCAGCGAGAGGTATGATCCATGCACAGAGCAGCACTCAGTTGTATACTACAACCTACCTGAGGTTCAACAGGCACTTCATGTTTATACTGATAATGCACCATCTAAATGGGCAACCTGCAGTGATGAGGTTTCTGCTACTTGGAAAGATTCTCCCAAGACAGTACTTGACGTTTATCGTGAACTTATACATGCAGGACTCCGTATTTGGATATTCAGTGGTGATACAGATGCCATAATCCCAGTTACATCCACCCGGTACAGTGTAGATGCTCTCAAGCTTCCAACAGTGGGCCCATGGCGTGCTTGGTATGACGATGGACAGGTGGGAGGATGGAGCCAAGAGTATGCGGGGCTTACTTTTGTTACAGTGAGGGGAGCAGGGCATGAAGTTCCTCTGCATAAACCCAAACAAGCTCTCACACTTATCAATGCCTTCTTAAAAGGAACCTCAATGCCCTCCTTGGAGCAACTGGCTGATTCTTGA 1410 0.4404 MLSLKWVFVLQILFTLIYLNTPASSSDPLVQQRLDKVQHLPGQAFNISFAHYSGYVTVNENSGRALFYWFIEAAEDPSSKPLVLWLNGGPGCSSIAYGQSEEIGPFHIKEDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDVSTNGDIRTAKDSLAFLLKWFERFPQYKGRDFYITGESYAGHYVPQLSQAIVRHNSATKAESINLKGYMVGNALTDDFHDHLGVFQFMWSAGMISDQTYKLLNVFCDFQPFIHSSASCDKIMDIASEEMGNVDPYSIFTPPCSVKVGFSNQLMKRLIRVGRISERYDPCTEQHSVVYYNLPEVQQALHVYTDNAPSKWATCSDEVSATWKDSPKTVLDVYRELIHAGLRIWIFSGDTDAIIPVTSTRYSVDALKLPTVGPWRAWYDDGQVGGWSQEYAGLTFVTVRGAGHEVPLHKPKQALTLINAFLKGTSMPSLEQLADS* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0783 469 Gene3D - 316 353 - -
Vvi11g0783 469 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Vvi11g0783 469 SUPERFAMILY alpha/beta-Hydrolases 37 460 IPR029058 -
Vvi11g0783 469 ProSitePatterns Serine carboxypeptidases, histidine active site. 427 444 IPR033124 GO:0004185
Vvi11g0783 469 FunFam Carboxypeptidase 363 457 - -
Vvi11g0783 469 Gene3D alpha/beta hydrolase 32 291 IPR029058 -
Vvi11g0783 469 FunFam Carboxypeptidase 32 291 - -
Vvi11g0783 469 Pfam Serine carboxypeptidase 41 457 IPR001563 GO:0004185|GO:0006508
Vvi11g0783 469 Gene3D - 363 457 - -
Vvi11g0783 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 440 IPR001563 GO:0004185|GO:0006508
Vvi11g0783 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Vvi11g0783 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Vvi11g0783 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Vvi11g0783 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 444 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0783 Vvi-Chr11 9158962 9171077 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0783 326 460 Calmodulin-binding Proteins AT2G22960 25.000 6.21e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0783 K16297 - vvi:100241649 967.992