Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi11g0777 | ATGCACCATGATTGCTCCCCTCCTTTAGTTCATCGAGACATATCGAGCAACAATGTTCTGTTAGATTCAAAAAGTAAAGCTCATGTATCCAACTTCGGAACAGCTCGGATTCTGAAGTCAGACTCATCTAATTGGACGTCATTTGCAGGAACTTTTGGTTATATTGCTCCAGAACTTGCTTACGTGTCAAATGTGGATAATAAAACAGATGTTTACAGCTTTGGAGTGGTAACATTGGAAGTTATTTTTGGAAAGCATCCTGGGGAACTCATCTCATCACTCTTATCATCAGTGTCTTCATCATCCTCATCGCCATCAACTATCTATCATTTACTGTTGAATGAAAAGATAGACCAGCGTCTCGCACCTCCTGTAAATCAAGTGGCCGAGGAAGTAGTGGTTGTAGTGAAGCTAGCACTTGCATGCTAA | 429 | 0.4103 | MHHDCSPPLVHRDISSNNVLLDSKSKAHVSNFGTARILKSDSSNWTSFAGTFGYIAPELAYVSNVDNKTDVYSFGVVTLEVIFGKHPGELISSLLSSVSSSSSSPSTIYHLLLNEKIDQRLAPPVNQVAEEVVVVVKLALAC* | 143 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi11g0777 | 142 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 142 | - | - | |
Vvi11g0777 | 142 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 93 | IPR011009 | - | |
Vvi11g0777 | 142 | PANTHER | LEUCINE RICH REPEAT KINASE 2 | 1 | 142 | - | - | |
Vvi11g0777 | 142 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 9 | 21 | IPR008266 | GO:0004672|GO:0006468 | |
Vvi11g0777 | 142 | ProSiteProfiles | Protein kinase domain profile. | 1 | 142 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi11g0777 | 142 | Pfam | Protein kinase domain | 9 | 89 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi11g0777 | Vvi-Chr11 | 8974480 | 8975326 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi11g0777 | 1 | 142 | Receptor kinase-like Gene Family | AT1G08590 | 36.667 | 9.32e-30 | 111 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Vvi11g0777 | Pkinase | 3e-18 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi11g0777 | - | - | vvi:100855152 | 210.69 |