Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0774 ATGCCATTTCATACTTCATCTTATTCTTCCTTCCTTGTCCAACTTCCCATGCCTTTCTTCTTCTTCTTTGTGATCTTTGTTAGCTCCCTTTATTCTTCATCACACGTGTATGCTTCTTTCCCAATTTCTTTGGCAGCTGCTGCTGGAGAACTGAAGGAAGCAGAAGCTCTTCTCACATGGAAAGCCAGTCTTAATAATCGAAGTCAGTCATTTCTGTCTTCTTGGTTTGGGGACAGTCCTTGCAACAACTGGGTTGGGGTTGTTTGTCATAATTCTGGAGGTGTGACGTCTTTAGATCTTCATAGTTCGGGTTTGAGAGGTACGCTCCACAGTCTCAATTTCTCATCGCTTCCCAACCTACTCACCCTCAATCTTTATAACAACTCACTCTATGGAAGTATCCCCTCTCACATAATGGGATTATTAAGATCACTTAATGATCTTGACCTCGCGGATAATAATCTTGATGGTTCAATCCCTTTTTCCATAGGAAATTTGGTCAACTTAACCATTTTATACCTTCATCACAATAAGCTTTCTGGTTTCATTCCTCAAGAAGTTGGATTGTTGAGATCCCTAAATGGGCTTGACTTATCAAGTAATAATCTCATTGGTTTAATCCCAACTTCTATAGGAAACCTGACTAACTTAACCCTTTTGCACCTTTTTGATAACCATCTTTATGGTTCCATTCCTTATGAAGTCGGATTTTTAAGATCTCTTCATGAACTTGACTTCTCGGGTAATGATCTCAATGGTTCAATCCCTTCTTCGATAGGAAATTTGGTCAACTTGACAATTTTGCACCTTTTTGATAATCACCTTTCTGGTTCTATACCCCAAGAAATTGGATTTTTGACTTCTCTTAATGAAATGCAACTGTCAGATAACATTCTCATAGGTTCAATTCCTCCTTCCATAGGAAACTTGAGTCAATTGACCAATTTGTACCTTTATGATAATAAACTTTCAGGTTTCATTCCTCAAGAAGTTGGATTGTTGATATCTCTAAATGATCTTGAGTTGTCTAACAATCATCTGTTTGGTTCAATTCCATCTTCCATAGTAAAATTAGGAAACTTAATGACCTTGTACCTTAATGATAACAATCTTAGTGGCCCCATTCCTCAAGGAATTGGATTGCTAAAATCTGTTAACGATCTTGACTTCTCAGATAACAATCTCATTGGTTCAATTCCTTCTTCCTTTGGAAATTTGATCTACTTAACTACATTGTATCTTTCTGATAACTGCTTATCTGGTTCTATTCCTCAAGAAGTTGGATTGTTAAGATCTCTTAATGAACTTGATTTCTCAGGTAACAATCTCACTGGTTTAATCCCTACTTCAATAGGAAACTTGACCAACTTAGCCACTTTGCTTCTTTTTGATAACCACTTGTCTGGTCCTATTCCTCAAGAATTCGGATTACTGAGATCTCTTAGTGATCTTGAGTTATCGAATAATAGTTTGACAGGTTCAATTCCTCCTTCTATAGGAAACTTGAGGAACTTAAGTTACCTATATCTTGCTGATAACAAACTCAGTGGCCCCATTCCTCCAGAGATGAACAATGTCACACATTTGAAAGAATTGCAATTGAGTGACAACAAATTCATTGGTTATTTGCCACAACAGATATGTTTGGGTGGAATGCTTGAAAACTTTTCAGCAGTAGGCAACCATTTCACTGGCCCAATCCCAAGTAGCTTGAGAAATTGTACTAGCTTGTTCAGACTCAGACTGGATAGAAACCAACTCGAAAGTAACGTATCAGAAGATTTTGGTATATATCCAAACTTGAATTATATTGATTTGAGTTACAACAAATTGTACGGGGAGCTTTCTAAGAGATGGGGCCGGTGTCACAGCCTGACAAGCATGAAAATCTCTCATAACAATATTTCTGGTACAATTCCAGCCGAACTTGGGGAAGCAACTCAATTACAATTACTTGACCTCTCTTCAAATCATTTAGTTGGGGGGATCCCAAAAGAGCTTGCAAATTTAACGTCATTATTCAATCTCAGTCTTCGTGACAACAAACTCTCAGGCCAGGTTCCTTCGGAGATAGGGAAGCTATCTGATCTTGCATTTTTTGACGTTGCATTGAACAATTTGAGTGGCTCAATTCCCGAACAACTGGGGGAATGCTCGAAATTATTTTACTTGAATTTGAGTAATAATAATTTTGGTGAAAGCATTCCTCCTGAGATTGGCAACATACATCGTCTTCAAAATCTCGATCTAAGTCAAAATTTGTTAACTGAAGAGATAGCCGTACAGATTGGAGAATTGCAAAGGTTGGAAACATTGAATCTCTCTCATAACAAGCTCTTTGGTTCCATCCCATCTACTTTCAATGATTTGCTAAGCTTGACATCTGTTGATATATCCTACAATCAACTGGAGGGTCCTGTTCCCAGCATCAAAGCCTTCCGAGAAGCTCCATTTGAGGCTTTCACAAATAACAAAGGTTTGTGTGGCAACCTCACTACTCTCAAGGCATGCAGAACTGGTGGAAGGAGGAAGAACAAATTTTCTGTTTGGATTCTAGTTCTTATGTTGAGCACTCCATTGCTTATATTTTCGGCCATTGGAACCCATTTCCTTTGCCGAAGATTAAGGGACAAAAAGGTGAAAAATGCAGAGGCACATATTGAAGATCTATTTGCAATATGGGGTCATGATGGGGAAGTGTCATATGAAGACATCATTCAGGCAACTGAGGACTTCAACCCCAAAAATTGCATTGGCACTGGAGGACATGGAGATGTTTACAAGGCTAATCTACCAACAGGTAGAGTTGTTGCCGTCAAACGCCTGCGCTCAACACAAAATAATGAAATGGCTGATTTGAAAGCTTTCGAAAGTGAGATTCAAGCTTTGGCAGCGATACGGCACCGCAACATTGTGAAGTTTTATGGTTCCTGTTCTAGTGCAAAACACTCATTTCTGGTTTATGAGTTTATGGATAGGGGAAGCTTGGGGAGCATTCTGACCAACGAGGAAAAAGCGATTCAATTAGATTGGAGTATGAGGCTAAATGTTATTAAAGGCATGGCTAGAGCTTTGTCTTATATACACCATGGTTGCGCCCCCCCTATAATTCATCGAGACATATCAAGCAACAATGTTCTATTGGATTCTGAATATGAAGCCCATATTTCCGACTTTGGTACAGCTAGGCTTTTAAAGCCCGACTCATCCAATTGGACTTCATTTGCAGGCACTTCCGGATACACTGCTCCAGAACTTGCTTACACAGCAAAGGTCGATGCTAAAAGTGATGTCTACAGCTTTGGAGTGGTAACATTGGAAGTGATTATGGGAAGGCATCCTGGTGAGCTTGTTTCATCTTTACTATCAATGGCCTCATCATCATCATCACCATCAAGGGTCTACCATTTACTGTTGATGGATGTGTTAGATCATCGGCTTTCACCACCCGTGCATCAGGTCTCTGAGGAAGTGGTCCACATTGTGAAGATAGCATTTGCGTGCTTGCATGCCAATCCCCAGTGTCGGCCAACTATGGAACAAGTTTATCAGAAGCTCTCAAACCAGTGGCCACCTTTGTCAAAACCATTTTCCATGATTACATTGGGAGAATTGCTTGGTCATGGGGATGAAATAAGCTGA 3642 0.3965 MPFHTSSYSSFLVQLPMPFFFFFVIFVSSLYSSSHVYASFPISLAAAAGELKEAEALLTWKASLNNRSQSFLSSWFGDSPCNNWVGVVCHNSGGVTSLDLHSSGLRGTLHSLNFSSLPNLLTLNLYNNSLYGSIPSHIMGLLRSLNDLDLADNNLDGSIPFSIGNLVNLTILYLHHNKLSGFIPQEVGLLRSLNGLDLSSNNLIGLIPTSIGNLTNLTLLHLFDNHLYGSIPYEVGFLRSLHELDFSGNDLNGSIPSSIGNLVNLTILHLFDNHLSGSIPQEIGFLTSLNEMQLSDNILIGSIPPSIGNLSQLTNLYLYDNKLSGFIPQEVGLLISLNDLELSNNHLFGSIPSSIVKLGNLMTLYLNDNNLSGPIPQGIGLLKSVNDLDFSDNNLIGSIPSSFGNLIYLTTLYLSDNCLSGSIPQEVGLLRSLNELDFSGNNLTGLIPTSIGNLTNLATLLLFDNHLSGPIPQEFGLLRSLSDLELSNNSLTGSIPPSIGNLRNLSYLYLADNKLSGPIPPEMNNVTHLKELQLSDNKFIGYLPQQICLGGMLENFSAVGNHFTGPIPSSLRNCTSLFRLRLDRNQLESNVSEDFGIYPNLNYIDLSYNKLYGELSKRWGRCHSLTSMKISHNNISGTIPAELGEATQLQLLDLSSNHLVGGIPKELANLTSLFNLSLRDNKLSGQVPSEIGKLSDLAFFDVALNNLSGSIPEQLGECSKLFYLNLSNNNFGESIPPEIGNIHRLQNLDLSQNLLTEEIAVQIGELQRLETLNLSHNKLFGSIPSTFNDLLSLTSVDISYNQLEGPVPSIKAFREAPFEAFTNNKGLCGNLTTLKACRTGGRRKNKFSVWILVLMLSTPLLIFSAIGTHFLCRRLRDKKVKNAEAHIEDLFAIWGHDGEVSYEDIIQATEDFNPKNCIGTGGHGDVYKANLPTGRVVAVKRLRSTQNNEMADLKAFESEIQALAAIRHRNIVKFYGSCSSAKHSFLVYEFMDRGSLGSILTNEEKAIQLDWSMRLNVIKGMARALSYIHHGCAPPIIHRDISSNNVLLDSEYEAHISDFGTARLLKPDSSNWTSFAGTSGYTAPELAYTAKVDAKSDVYSFGVVTLEVIMGRHPGELVSSLLSMASSSSSPSRVYHLLLMDVLDHRLSPPVHQVSEEVVHIVKIAFACLHANPQCRPTMEQVYQKLSNQWPPLSKPFSMITLGELLGHGDEIS* 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0774 1213 FunFam Probable leucine-rich repeat receptor-like protein kinase At1g35710 446 547 - -
Vvi11g0774 1213 SUPERFAMILY L domain-like 78 397 - -
Vvi11g0774 1213 SMART LRR_typ_2 117 141 IPR003591 -
Vvi11g0774 1213 SMART LRR_typ_2 478 502 IPR003591 -
Vvi11g0774 1213 SMART LRR_typ_2 670 694 IPR003591 -
Vvi11g0774 1213 SMART LRR_typ_2 766 789 IPR003591 -
Vvi11g0774 1213 SMART LRR_typ_2 166 189 IPR003591 -
Vvi11g0774 1213 SMART LRR_typ_2 262 286 IPR003591 -
Vvi11g0774 1213 SMART LRR_typ_2 358 382 IPR003591 -
Vvi11g0774 1213 SMART LRR_typ_2 190 213 IPR003591 -
Vvi11g0774 1213 SMART LRR_typ_2 526 550 IPR003591 -
Vvi11g0774 1213 SMART LRR_typ_2 214 238 IPR003591 -
Vvi11g0774 1213 SMART LRR_typ_2 430 453 IPR003591 -
Vvi11g0774 1213 SMART LRR_typ_2 310 334 IPR003591 -
Vvi11g0774 1213 SMART LRR_typ_2 718 742 IPR003591 -
Vvi11g0774 1213 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 447 1187 - -
Vvi11g0774 1213 Gene3D Ribonuclease Inhibitor 445 548 IPR032675 -
Vvi11g0774 1213 FunFam Uncharacterized protein 288 445 - -
Vvi11g0774 1213 FunFam Leucine-rich repeat receptor protein kinase MSP1 875 990 - -
Vvi11g0774 1213 Pfam Leucine Rich Repeat 433 454 IPR001611 GO:0005515
Vvi11g0774 1213 Pfam Leucine Rich Repeat 768 788 IPR001611 GO:0005515
Vvi11g0774 1213 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 548 840 - -
Vvi11g0774 1213 Pfam Leucine rich repeat 599 659 IPR001611 GO:0005515
Vvi11g0774 1213 PRINTS Leucine-rich repeat signature 766 779 - -
Vvi11g0774 1213 PRINTS Leucine-rich repeat signature 481 494 - -
Vvi11g0774 1213 CDD STKc_IRAK 918 1186 - -
Vvi11g0774 1213 Gene3D Transferase(Phosphotransferase) domain 1 991 1191 - -
Vvi11g0774 1213 FunFam MDIS1-interacting receptor like kinase 2 991 1192 - -
Vvi11g0774 1213 Gene3D Phosphorylase Kinase; domain 1 873 990 - -
Vvi11g0774 1213 SUPERFAMILY RNI-like 518 834 - -
Vvi11g0774 1213 SUPERFAMILY Protein kinase-like (PK-like) 898 1186 IPR011009 -
Vvi11g0774 1213 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1036 1048 IPR008266 GO:0004672|GO:0006468
Vvi11g0774 1213 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 212 287 - -
Vvi11g0774 1213 ProSitePatterns Protein kinases ATP-binding region signature. 918 940 IPR017441 GO:0005524
Vvi11g0774 1213 Gene3D Ribonuclease Inhibitor 215 286 IPR032675 -
Vvi11g0774 1213 ProSiteProfiles Protein kinase domain profile. 912 1191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11g0774 1213 FunFam Probable leucine-rich repeat receptor-like protein kinase At1g35710 50 208 - -
Vvi11g0774 1213 SUPERFAMILY L domain-like 360 614 - -
Vvi11g0774 1213 Pfam Leucine rich repeat N-terminal domain 52 89 IPR013210 -
Vvi11g0774 1213 Gene3D Ribonuclease Inhibitor 549 839 IPR032675 -
Vvi11g0774 1213 Gene3D Ribonuclease Inhibitor 287 444 IPR032675 -
Vvi11g0774 1213 SMART LRR_sd22_2 502 528 - -
Vvi11g0774 1213 SMART LRR_sd22_2 190 216 - -
Vvi11g0774 1213 SMART LRR_sd22_2 358 390 - -
Vvi11g0774 1213 SMART LRR_sd22_2 238 264 - -
Vvi11g0774 1213 SMART LRR_sd22_2 670 699 - -
Vvi11g0774 1213 SMART LRR_sd22_2 430 456 - -
Vvi11g0774 1213 SMART LRR_sd22_2 742 761 - -
Vvi11g0774 1213 SMART LRR_sd22_2 310 331 - -
Vvi11g0774 1213 SMART LRR_sd22_2 166 187 - -
Vvi11g0774 1213 Gene3D Ribonuclease Inhibitor 50 210 IPR032675 -
Vvi11g0774 1213 Pfam Protein kinase domain 915 1184 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0774 Vvi-Chr11 8714231 8718592 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0774 46 668 Receptor kinase-like Gene Family AT4G08850 40.351 4.68e-125 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vvi11g0774 Pkinase 4.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0774 - - vvi:100260449 2084.3