Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0767 ATGAGCATCCGAGACCGGCATTTTAGGAGAGACCTCAGAGCAAGTCCTCTTAGCAGAATAGGATTGAAAGTTAGGTTGCATGCAGCCATGGGCGCTATATATATACCCCTCTTCTATTCTATTTTACAAGGCATTCATATAAGGTGCTGCAAATCGCTTATCCTATTCAAGTTCTTCCCCTGGGTTTGTGTCTCCAGAAAAAGAAAAATGGTGAAATTGATGGCTACTTACACGGTGAGACCAGCCAAGGAGACACCGGGAGGCTACAGGTGTTTATCAGACAGTGATCAAGTTAGAGCTCTCACTCACGCACCCACCATCTACTTTTACCCACCTGTAAATGTGTCCCTTGAATCGGCCACCGAGATTCTGAGGCACTCTCTGAGTGAGGCGTTGGTGATTTTCTATCCACTAGCGGGACGCTTGCACTGGATTGGTGGAGGATGTAACTCAGTTCAGGAATTTCCACACTGTTGGATGCGCGAAAGGAGCTTTCTATGGGAACCCTAA 510 0.4686 MSIRDRHFRRDLRASPLSRIGLKVRLHAAMGAIYIPLFYSILQGIHIRCCKSLILFKFFPWVCVSRKRKMVKLMATYTVRPAKETPGGYRCLSDSDQVRALTHAPTIYFYPPVNVSLESATEILRHSLSEALVIFYPLAGRLHWIGGGCNSVQEFPHCWMRERSFLWEP* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0767 169 Gene3D - 70 157 IPR023213 -
Vvi11g0767 169 Pfam Transferase family 70 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0767 Vvi-Chr11 8559380 8567529 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0767 71 142 Monolignol Biosynthesis Gene Families AT5G48930 40.278 8.29e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0767 K13065 - vvi:100246835 164.851