LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi11g0767	ATGAGCATCCGAGACCGGCATTTTAGGAGAGACCTCAGAGCAAGTCCTCTTAGCAGAATAGGATTGAAAGTTAGGTTGCATGCAGCCATGGGCGCTATATATATACCCCTCTTCTATTCTATTTTACAAGGCATTCATATAAGGTGCTGCAAATCGCTTATCCTATTCAAGTTCTTCCCCTGGGTTTGTGTCTCCAGAAAAAGAAAAATGGTGAAATTGATGGCTACTTACACGGTGAGACCAGCCAAGGAGACACCGGGAGGCTACAGGTGTTTATCAGACAGTGATCAAGTTAGAGCTCTCACTCACGCACCCACCATCTACTTTTACCCACCTGTAAATGTGTCCCTTGAATCGGCCACCGAGATTCTGAGGCACTCTCTGAGTGAGGCGTTGGTGATTTTCTATCCACTAGCGGGACGCTTGCACTGGATTGGTGGAGGATGTAACTCAGTTCAGGAATTTCCACACTGTTGGATGCGCGAAAGGAGCTTTCTATGGGAACCCTAA	510	0.4686	MSIRDRHFRRDLRASPLSRIGLKVRLHAAMGAIYIPLFYSILQGIHIRCCKSLILFKFFPWVCVSRKRKMVKLMATYTVRPAKETPGGYRCLSDSDQVRALTHAPTIYFYPPVNVSLESATEILRHSLSEALVIFYPLAGRLHWIGGGCNSVQEFPHCWMRERSFLWEP*	170

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi11g0767	169	Gene3D	-	70	157	IPR023213	-
	Vvi11g0767	169	Pfam	Transferase family	70	143	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi11g0767	Vvi-Chr11	8559380	8567529	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi11g0767	71	142	Monolignol Biosynthesis Gene Families	AT5G48930	40.278	8.29e-10	54.7

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi11g0767	K13065		-	vvi:100246835	164.851

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