Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0760 ATGGCTGCTTCCAAGGCTGAGGGGAAGGCGATTGGCATCGACTTGGGCACCACCTACAGCTGCGTGGGTGTATGGCTACACGACCGAGTCGAGATCATCCCCAACGATCAAGGTAACAGGACTACTCCCTCTTACGTTGCTTTCACCGATACAGAGCGTTTGATCGGGGATGCGGCGAAGAATCAAGTGGCTTTGAATCCTAATAACACAGTCTTCGACGCCAAGCGACTTATTGGGAGGAGGTTTTCCGACCCATCAGTGCAGGGCGACATGAAGCTCTGGCCGTTCAAGGTGGTTCCGGGTCCAGGCGACAAGCCCTTTATTGTTGTTCAGTACAAAGGTGAGGAGAAGAAGTTCACAGCGGAGGAGATTTCGTCGATGGTGCTGGTGAAGATGAGGGAGACAGCGGAAGCGTTCTTGGGGCACAGTGTGAACAACGCCGTGGTTACGGTGCCGGCCTACTTCAACGATTCTCAGAGGCAGGCAACCAAGGACGCTGGAGCTATTGCGGGGCTGAACGTGATGAGAATCATCAACGAGCCTACTGCTGCAGCAATTGCTTATGGGTTGGACAAGAAGGCGTCGCGAAAGGGTGAGCAGAATGTGCTTATCTTCGATCTTGGTGGCGGAACGTTTGATGTTTCTCTGCTGACGATTGAGGAGGGCATATTCGAGGTGAAGGCCACAGCTGGAGATACCCATCTGGGTGGTGAGGATTTTGATAACAGACTCGTGAATCACTTCGTTTCGGAGTTCAGAAGGAAGCATAAGAAGGACATCGGCGGCAATGCAAGGGCTCTGAGGAGGTTGAGGACTGCTTGCGAAAGGGCCAAGAGGACTCTGTCTTCCACCACGCAGACCACAATCGAAATTGATTCTCTGTACGAGGGGACTGATTTCTACGCAACCATCACGAGAGCGAGGTTCGAGGAACTGTGCATGGATTTGTTCAGGAAGTGTATGGAGCCGGTGGAGAAGTGCCTCCGCGACGCTAAGATCGACAAGGGCCAAGTCCATGAGGTGGTCCTCGTCGGTGGGTCGACCAGAATTCCCAAAGTTCAGCAGCTCTTGCAGGACTTCTTCAACGGCAAAGAGCTCTGCAAGAGCATCAACCCCGATGAAGCCGTTGCGTACGGAGCCGCTGTTCAAGCTGCTATTCTGAGCGGTGAAGGCAACGAGAAAGTACAAGATCTGCTACTTCTAGATGTCACGCCTCTCAGTCTCGGCCTCGAAACCGCTGGCGGAGTCATGACCGTGTTGATTCCTCGCAACACCACCATTCCCACGAAGAAAGAGCAGATCTTCTCCACATACTCCGACAACCAGCCTGGAGTTCTGATCCAAGTGTACGAAGGCGAGCGAGCTCGAACCAAGGACAACAACCTTCTAGGCAAATTTGAACTAACCGGAATCCCGCCGGCGCCGAGAGGTGTGCCCCAGATCAATGTCTGCTTCGATATAGATGCCAATGGCATTTTGAACGTGTCGGCAGAAGACAAAACCGCCGGAGTGAAGAACAAGATCACCATCACCAACGACAAGGGAAGACTGAGTAAGGAAGAGATTGAGAAGCTGGTGAAAGACGCGGAGCAATACAAGGCTGAGGATGAGGAAGTAAAGAGGAAGGTGGAGGCGAAGAACTCGCTGGAGAATTACGCCTACAACATGAGGAACACCGTGAAGGACGAGAAGATCGCCGGGAAGTTGAGTGGGCCCGACAAGCAGGCGATAGAGAAGGCGGTGGAGGACACGATAGGGTGGCTGGAGGGGAACCAGCTGGCAGAGGTGGAAGAGTTTGAGGACAAGTTGAAGGAGCTGGAGGGCATCTGCAATCCCATAATCGCGAAAATGTATCAGGGTAGTGGTGGAGATGCGTCCATGGGCGGTGCCGGTGACATGCCTGGTGCGGGCTACGGGGGCTCCACCGGCTCAGGCGGCGGTGCAGGGCCCAAGATTGAAGAGGTTGATTAA 1971 0.5383 MAASKAEGKAIGIDLGTTYSCVGVWLHDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPNNTVFDAKRLIGRRFSDPSVQGDMKLWPFKVVPGPGDKPFIVVQYKGEEKKFTAEEISSMVLVKMRETAEAFLGHSVNNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRKGEQNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVSEFRRKHKKDIGGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEGTDFYATITRARFEELCMDLFRKCMEPVEKCLRDAKIDKGQVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIEKLVKDAEQYKAEDEEVKRKVEAKNSLENYAYNMRNTVKDEKIAGKLSGPDKQAIEKAVEDTIGWLEGNQLAEVEEFEDKLKELEGICNPIIAKMYQGSGGDASMGGAGDMPGAGYGGSTGSGGGAGPKIEEVD* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0760 656 FunFam Heat shock 70 kDa 236 319 - -
Vvi11g0760 656 FunFam Heat shock 70 kDa protein 72 127 - -
Vvi11g0760 656 Gene3D Actin; Chain A, domain 4 236 319 - -
Vvi11g0760 656 MobiDBLite consensus disorder prediction 626 656 - -
Vvi11g0760 656 SUPERFAMILY Actin-like ATPase domain 9 192 IPR043129 -
Vvi11g0760 656 PANTHER HEAT SHOCK PROTEIN 70KDA 10 584 IPR013126 GO:0005524|GO:0140662
Vvi11g0760 656 Gene3D - 11 385 - -
Vvi11g0760 656 FunFam Heat shock protein 70 547 620 - -
Vvi11g0760 656 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 544 624 IPR029048 -
Vvi11g0760 656 Gene3D - 72 127 - -
Vvi11g0760 656 FunFam Heat shock 70 kDa protein 198 269 - -
Vvi11g0760 656 Gene3D - 546 620 IPR029048 -
Vvi11g0760 656 FunFam Heat shock cognate 70 kDa protein 2 320 367 - -
Vvi11g0760 656 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Vvi11g0760 656 ProSitePatterns Heat shock hsp70 proteins family signature 3. 341 355 IPR018181 -
Vvi11g0760 656 Gene3D - 193 367 - -
Vvi11g0760 656 FunFam Heat shock 70 kDa 392 546 - -
Vvi11g0760 656 ProSitePatterns Heat shock hsp70 proteins family signature 2. 204 217 IPR018181 -
Vvi11g0760 656 Coils Coil 519 542 - -
Vvi11g0760 656 CDD HSPA1-2_6-8-like_NBD 10 388 - -
Vvi11g0760 656 SUPERFAMILY Actin-like ATPase domain 197 389 IPR043129 -
Vvi11g0760 656 FunFam Heat shock protein 70 11 197 - -
Vvi11g0760 656 Pfam Hsp70 protein 10 619 IPR013126 GO:0005524|GO:0140662
Vvi11g0760 656 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 392 545 IPR029047 -
Vvi11g0760 656 PRINTS 70kDa heat shock protein signature 9 22 - -
Vvi11g0760 656 PRINTS 70kDa heat shock protein signature 147 167 - -
Vvi11g0760 656 PRINTS 70kDa heat shock protein signature 370 390 - -
Vvi11g0760 656 PRINTS 70kDa heat shock protein signature 59 67 - -
Vvi11g0760 656 PRINTS 70kDa heat shock protein signature 37 49 - -
Vvi11g0760 656 PRINTS 70kDa heat shock protein signature 338 354 - -
Vvi11g0760 656 PRINTS 70kDa heat shock protein signature 397 416 - -
Vvi11g0760 656 PRINTS 70kDa heat shock protein signature 478 494 - -
Vvi11g0760 656 PRINTS 70kDa heat shock protein signature 210 220 - -
Vvi11g0760 656 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 393 550 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0760 Vvi-Chr11 8347685 8349655 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0760 3 656 Calmodulin-binding Proteins AT1G16030 84.862 0.0 1145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0760 K03283 - vvi:100265708 1248.8