Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0758 ATGCAGGCTGATCAGACGGTGTTGAGCTTGAGACCTGGTGGTGGCGGCGGCGGCGGCGGCGGAGCCAATCGAGGAAGCAGATTCCTTGGTCCTCGGTTCGATTCGTCTTCTTCTTCGCCTTTTGGTTCATCTTCTGATCTTCCTGTTCTGCGTCCTCATGGCGGTGCTCCTTCCTCTTTCTCTATAAAGGCTGGGGATAGTCGGTTTGAGGGTCGTGAGCGTGTGCGGTTCACCCGAGACAAACTGTTGCAACTTAGGGAGGTTGTTGATGTCCCTGAGGATATATTGAAAATCAAACAAGAGATAGAAGCTGAATTATTTGGTGAAGATCAAAATTGGGGTCGGGGAGAAAGCAATCTGCCAAATCAATCTCAGAGTCGTTATTCTGAGCCAGATAATCGTGACTGGCGTGGCCGGTCTGCACAGCTTCCTGCCTCTGGAGAGGAGAGGTCATGGTTTGACTCTAGACAGCAGGAAGCAAACCAATTTAATCGTCAAGACCAACTAAACTCCCAGTTTGCAAAGGCTCAAATATCTTCTGTCCTAGGGGGACCTGCTCCTGCTCTAGTGAAGGCTGAGGTGCCATGGTCCGCTCGACGTGTGAATCTTTCTGAGAAGGAACGTGTCTTGAAGACAGTGAAAGGGATACTGAACAAGCTCACTCCAGAGAAGTTTGATCTTCTCAAGGGCCAATTGATTGACTCTGGGATCACAACAGCTGATATCTTGAAGGGAGTCATCTCGCTGATATTTGATAAGGCAGTGCTAGAACCCACTTTTTGTCCCATGTATGCCCTCCTGTGCTCTGATCTTAATGAAAAGCTTCCCCCATTCCCATCTGATGAACCTGGTGGAAAAGAAATCACTTTTAAGCGAGTTCTCTTGAATAACTGCCAGGAGGCATTTGAAGGTTCTGATAAACTGAGAGCAGAAATAAGGCAGATGACTGCCCCTGAACAAGAGTTGGAGCGAAGAGACAAGGAAAGAATGGTTAAGCTTCGAACTTTGGGAAACATCCGTCTTATTGGGGAGCTTCTGAAACAGAAAATGGTACCTGAAAAGATTGTCCACCACATTGTTCAGGAGCTTTTAGGACATGATAATAAATCTTGTCCTGATGAAGAGAATGTTGAGGCCATATGCCAGTTCTTTAACACTATAGGTAAGCAGCTTGATGAAAGTACAAAATCTAGGCGCATAAATGATATGTACTTTAGCCGATTGAAGGAATTAACGACAAACCCCCAATTGGCTCCACGTCTGAGGTTCATGGTTCGTGATGTTCTTGATCTGCGTGCAAACAGTTGGGTTCCCAGGCGGGAAGAGGTGAAAGCTAAAACCATAACAGAAATCCATACAGAGGCAGAAAAAAATCTTGGGTTGCGTCCAGGTGCCACTGCAAGCATTAGAAATAGTCGCAACATTGTTTCTGGTGCTCAAGGGACCATGGGCCCTGGTGGCTTCCCAATCACCCGGCCTGGCTCTGGGGGGATGATGCCTGGAATGCCAGGAACCAGGAAGATGCCTGGTATGCCTGGAATTGATAACGACAATTGGGAGGTTCCAAGGACCCGAGCCATGCCTAGAGGTGATGGATCAGGTGTTCAGACTCGTGTCCAGCAGACCCATGTCCAGTCGCCATTGATGGGCAAGTCAATGCCACTGAACTCAAGACTGTTACCTCAGGGCAGTGCTGGTTTTATAAGTGGTAGGACAAGTGCCCTATTGCAGGGTAGTGGTCCCCCTCCTGCCCGCACTGCCAACTTTGGCTTGGGTATGGAACCTGCACTCCAAAGCCCTGTGCCTGCTAAATCTGTTCCTGTTGCATCTATTGTTCCAGCAGCTGAGAAACCAGTGACTCCTGCTGCCAGATTGAATTCAGATGACCTCCGGAGAAAAACAGTCTCACTTCTTGAGGAGTACTTTGGTGTTCGGATTTTAGATGAAGCACTACAGTGCGTGGAGGAACTAAAGTCCCCAGCTTACCATCCCGAAGTTGTGAAGGAGGCTATTTCCCTTGCACTAGAAAAGAGCCCACCTTGTGTTGACCCTGTTGCGAAACTCCTGGAGTTCTTGTTTTCCAAGAAGGTTCTTACCACTATGGATATAGGGACTGGATGTTTGATGTACGGATCAATGCTGGATGATATTGGCATTGATTTACCAAAAGCGCCGAATAGCTTTGGTGAGGTTATTGGGAACCTAGTTTTGGCTGGGGCATTGGACTTCAAGGTAGTGACGGAAATCATGAAGAAAGTGGAGGATGACAGGTTTCAGAAAATGATATTTGATGCTGTGATGAGGATTGTCAGTTCCAGTCCTTCTGGGCAAGGGGTGTTGGATTCGCAGGCAGCCGACATTGCAGCTTGCCAGAGCCTGCTCTAG 2385 0.4809 MQADQTVLSLRPGGGGGGGGGANRGSRFLGPRFDSSSSSPFGSSSDLPVLRPHGGAPSSFSIKAGDSRFEGRERVRFTRDKLLQLREVVDVPEDILKIKQEIEAELFGEDQNWGRGESNLPNQSQSRYSEPDNRDWRGRSAQLPASGEERSWFDSRQQEANQFNRQDQLNSQFAKAQISSVLGGPAPALVKAEVPWSARRVNLSEKERVLKTVKGILNKLTPEKFDLLKGQLIDSGITTADILKGVISLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSDEPGGKEITFKRVLLNNCQEAFEGSDKLRAEIRQMTAPEQELERRDKERMVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGHDNKSCPDEENVEAICQFFNTIGKQLDESTKSRRINDMYFSRLKELTTNPQLAPRLRFMVRDVLDLRANSWVPRREEVKAKTITEIHTEAEKNLGLRPGATASIRNSRNIVSGAQGTMGPGGFPITRPGSGGMMPGMPGTRKMPGMPGIDNDNWEVPRTRAMPRGDGSGVQTRVQQTHVQSPLMGKSMPLNSRLLPQGSAGFISGRTSALLQGSGPPPARTANFGLGMEPALQSPVPAKSVPVASIVPAAEKPVTPAARLNSDDLRRKTVSLLEEYFGVRILDEALQCVEELKSPAYHPEVVKEAISLALEKSPPCVDPVAKLLEFLFSKKVLTTMDIGTGCLMYGSMLDDIGIDLPKAPNSFGEVIGNLVLAGALDFKVVTEIMKKVEDDRFQKMIFDAVMRIVSSSPSGQGVLDSQAADIAACQSLL* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0758 794 Pfam MA3 domain 630 742 IPR003891 -
Vvi11g0758 794 MobiDBLite consensus disorder prediction 1 64 - -
Vvi11g0758 794 SUPERFAMILY ARM repeat 202 438 IPR016024 -
Vvi11g0758 794 SMART ma3_7 630 742 IPR003891 -
Vvi11g0758 794 ProSiteProfiles MI domain profile. 629 751 IPR003891 -
Vvi11g0758 794 FunFam Eukaryotic translation initiation factor isoform 4G-2 201 436 - -
Vvi11g0758 794 Gene3D - 201 436 - -
Vvi11g0758 794 SUPERFAMILY ARM repeat 624 782 IPR016024 -
Vvi11g0758 794 MobiDBLite consensus disorder prediction 30 45 - -
Vvi11g0758 794 MobiDBLite consensus disorder prediction 115 129 - -
Vvi11g0758 794 MobiDBLite consensus disorder prediction 110 152 - -
Vvi11g0758 794 Pfam MIF4G domain 210 434 IPR003890 GO:0003723|GO:0005515
Vvi11g0758 794 FunFam Eukaryotic translation initiation factor isoform 4G-2 623 785 - -
Vvi11g0758 794 SMART if4_15 210 435 IPR003890 GO:0003723|GO:0005515
Vvi11g0758 794 Gene3D - 623 784 - -
Vvi11g0758 794 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 66 783 IPR045208 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0758 Vvi-Chr11 8303568 8312921 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0758 2 793 Eukaryotic Initiation Factors Gene Family AT5G57870 65.337 0.0 990
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0758 K03260 - vvi:100260481 1523.06