Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0752 ATGGCCACTCGCTGCGAAATCTTCTGCGAAATACTAATTGCGATCTTGCTTCCTCCGGTTGGTGTCTGCTTCCGACATGGTTGCTGCAGCGTTGAGTTCTGTATTTGCTTGCTCCTCACTCTGCTTGGTTACATTCCCGGAATAATCTACGCTCTCTATGTGATCGTGTTCGTCGATCGCGATCCCGATGACTACTACTGGCGCCCTCTCAATGCCTAG 219 0.5068 MATRCEIFCEILIAILLPPVGVCFRHGCCSVEFCICLLLTLLGYIPGIIYALYVIVFVDRDPDDYYWRPLNA* 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0752 72 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 3 59 IPR000612 GO:0016020
Vvi11g0752 72 ProSitePatterns Uncharacterized protein family UPF0057 signature. 12 27 IPR000612 GO:0016020
Vvi11g0752 72 Pfam Proteolipid membrane potential modulator 8 56 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0752 Vvi-Chr11 8219130 8219464 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0752 1 72 RCI2 Gene Family AT4G30650 68.056 1.34e-31 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0752 - - vvi:100244900 158.688