Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0747 ATGGAGAGTGCCATGGCAGCCCGAAGGAGGACCCTACTCTTGTTGTCCTTATTACTACTCTCTTCAATCACCAGCGATGCTGATGCTGCCCCTAAACAACAATCCCTCGATCGAATCTCAGCACTTCCCGGACAACCACCGGTCACCTTCTCCCAGTTTTCCGGCTACGTTACCGTCAATGAGCACCACGGCCGAGCTCTCTTCTACTGGCTAACCGAAGCCACCACATATCCGGAGAAAAAACCTCTTGTTCTTTGGCTCAATGGAGGACCGGGTTGTTCATCAGTGGCATATGGAGCATCAGAGGAAATTGGGCCATTTCGGCTTTACAGAACTGGTTCATCTCTTTATCTCAACAAGTATTCATGGAATAGAGTAGCAAATATTCTCTTCCTGGAATCACCTGCTGGTGTCGGCTTCTCCTACACAAATACAAGCTCCGATCTCAAAAACTCCGGTGATCGACGAACAGCTCAGGATGCTTTAATTTTTTTGGTGAGATGGATGTCAAGATTCCCAAAATACAAACACAGAGAATTCTACATTGCTGGAGAGAGCTATGCTGGTCATTACGTCCCCCAATTAGCGAAGAAAATCCACGATTACAACAAAGCATCGTCCCATCCCATCATTAATCTTAAAGGATTCATGGTGGGCAATGCAGTAACAGATAACTACTATGACAGCATTGGGACTGTCGCATTCTGGTGGAGCCATTCCATGATTTCAGATAGAAGCTATCGATCAATCATGGATCATTGCGATTTCATTGCAGAGAGAACTTCTGAGAAGTGTGATGAGGCAGTGAGTTATGCTATAAACCATGAGTTCGGAGACATTGATCAATACAGCATTTACACACCATCTTGCATGGCATTGCCAAATAGTAGTACCATACGGTCTCCACGCTTCAAGAACAGTCTTGTACGTAGACGGGTTTCGGGATACGATCCATGTACTGAGAATTATGCAGAGAAATACTATAATCGACCTGATGTGCAGAAGGCCATGCATGCAAATTCTACTGGAATTCCTTACAAATGGACTGCTTGCAGTGGTGTTCTTATAAAGTACTGGAATGACTCTGAAGCCTCCATGCTACCTATTTACAAGGAACTAATTGAAGCTGGTCTCAGGATCTGGGTTTTCAGCGGGGACACAGATGCTGTAGTCCCAGTGACTGCAACTAGATTCTCCCTCAACCATCTCAATCTCACCGTCAAGACTCCATGGTATCCATGGTACTCGGGTGGCCAGGTAGGGGGGTGGACAGAGGTGTATGAAGGGCTAACCTTTGCCACTGTGAGAGGTGCCGGGCATGAGGTTCCTCTGTTTCAGCCGATGCGAGCTTTCCTTCTCTTCAGATCATTCTTGGGTGGAAAGCAACTACCAAGTTCCTCAGAAAATTAG 1410 0.4624 MESAMAARRRTLLLLSLLLLSSITSDADAAPKQQSLDRISALPGQPPVTFSQFSGYVTVNEHHGRALFYWLTEATTYPEKKPLVLWLNGGPGCSSVAYGASEEIGPFRLYRTGSSLYLNKYSWNRVANILFLESPAGVGFSYTNTSSDLKNSGDRRTAQDALIFLVRWMSRFPKYKHREFYIAGESYAGHYVPQLAKKIHDYNKASSHPIINLKGFMVGNAVTDNYYDSIGTVAFWWSHSMISDRSYRSIMDHCDFIAERTSEKCDEAVSYAINHEFGDIDQYSIYTPSCMALPNSSTIRSPRFKNSLVRRRVSGYDPCTENYAEKYYNRPDVQKAMHANSTGIPYKWTACSGVLIKYWNDSEASMLPIYKELIEAGLRIWVFSGDTDAVVPVTATRFSLNHLNLTVKTPWYPWYSGGQVGGWTEVYEGLTFATVRGAGHEVPLFQPMRAFLLFRSFLGGKQLPSSSEN* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0747 469 ProSitePatterns Serine carboxypeptidases, histidine active site. 430 447 IPR033124 GO:0004185
Vvi11g0747 469 FunFam Carboxypeptidase 366 460 - -
Vvi11g0747 469 Gene3D - 319 355 - -
Vvi11g0747 469 Gene3D - 366 460 - -
Vvi11g0747 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 193 IPR001563 GO:0004185|GO:0006508
Vvi11g0747 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Vvi11g0747 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 443 IPR001563 GO:0004185|GO:0006508
Vvi11g0747 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Vvi11g0747 469 Pfam Serine carboxypeptidase 44 459 IPR001563 GO:0004185|GO:0006508
Vvi11g0747 469 ProSitePatterns Serine carboxypeptidases, serine active site. 182 189 IPR018202 GO:0004185
Vvi11g0747 469 FunFam Carboxypeptidase 33 292 - -
Vvi11g0747 469 Gene3D alpha/beta hydrolase 34 292 IPR029058 -
Vvi11g0747 469 SUPERFAMILY alpha/beta-Hydrolases 41 463 IPR029058 -
Vvi11g0747 469 FunFam Carboxypeptidase 315 463 - -
Vvi11g0747 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 447 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0747 Vvi-Chr11 8125412 8131947 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0747 302 463 Calmodulin-binding Proteins AT2G22960 28.221 1.80e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0747 K16297 - vvi:100265544 954.51