Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0730 ATGGCTGGGAACCAGAGCTTTGAAGCTCCCGAAGCAGAGAAGGCTGAGCCGAACCCCGAGTCTGATTCGGGGTCGGATTCCGACTCGGCCGAATCGGGCTCTGAGGACGGAGAGGGACTCAGTGACTCGGAGGGAGTTGGAGCTGCTGAGTTGGGAGAGCCTCGTGAATCGGAAACCCTAGCTGTGGCTTCGTCGATTACGGAGAGTGGTTCGCAGTTACTCTCAGGTTCGGCGCTCAATTCTACTTCGCAGTCGCTTGCCTCGGTTGAATTCAAGGAGCAAGCTGGGGTGTGTCATCAAGAAGTTCGGACTACTGTAACAGCCCAGACCACTCATGTCCAAACAAAGAAGCAACTTCAGTCATCTGGTTGTCCAACTTCGTCAGTGGAATTATCACCAACTTCTGTTACCCAGTCTATTCAATCGGCTCCAAGTCCAACAATACTAGAACAAAGGCCATCACCATTTCCAAAGGTTAACAGTGAATGTATGCCAGAAGGGAACCAGAAAAATTCTTCTGACCTGAAAACTATATCTACTGTTCCTTCTGTGAAGACACCTTCTGCAGATGGCTACAATTGGCGGAAATATGGTCAGAAGCAGGTAAAGAGTCCTAAAGGTTCTCGAAGCTATTACAAATGCACATATTCTGACTGTTATGCTAAAAAGATTGAATGTTGTGATGACTCGGGCCAAGTGATAGAAATTATTTATAAAAGTCGGCACAATCATGATCCGCCTCGGAAGATTAACTGCATGAAAGAAGGCAAGCTTTCACCAGTTGGGCCTGTTACAGGGAATAGTACTACAGCTGACCCAGTAAGAATGCTTAATGATTCAGATCCATCTACATCTTCAAAAGAACCTGTACAAGAAACACCACTGATACCTGAAAGAAAAAGGCCAAATTCAGATGCTTCTGATGAGAATCCTGAAATTAAGGTTAAGGAGGAGCATATTGATGAGCCGGAGCCTAAACGGAGATCGAAGAAAAGCAGCTTAGGGAATTCAGGTTCTCACTTTAAACCTGGAAAAAAACCTAAATTTGTTGTGCATGCGGCGGGTGATGTGGGGATCTCAGGTGATGGCTACAGATGGCGCAAATATGGACAAAAGATGGTGAAGGGAAACCCTCACCCCAGGAACTATTACAGATGCACTTCTGCTGGATGTCCTGTTCGTAAGCATATTGAGACAGCCATAGATAACACCAGTGCTGTCATAATAACATACAAGGGGATACACGACCATGACATGCCTGTACCAAAAAAGCGACATGGCCCACCAAGTGCTCCCCTTGTTGCGGCTGCTGCTCCTGCTTCCATGAACAGCTTGCAGTTTAAGAAAACTGAAGCTTTCCAAAATCAAATATCTTCAACTCAATGGTCAGTGGACATGGAAGGTGAATTGGCAGCTGAGGAATTGGATCCAGGAGGGGAGAAAGCCATGGAATCTGCTCGAACTCTCCTGAGCATTGGATTTGAAATCAAGCCGTGCTGA 1500 0.464 MAGNQSFEAPEAEKAEPNPESDSGSDSDSAESGSEDGEGLSDSEGVGAAELGEPRESETLAVASSITESGSQLLSGSALNSTSQSLASVEFKEQAGVCHQEVRTTVTAQTTHVQTKKQLQSSGCPTSSVELSPTSVTQSIQSAPSPTILEQRPSPFPKVNSECMPEGNQKNSSDLKTISTVPSVKTPSADGYNWRKYGQKQVKSPKGSRSYYKCTYSDCYAKKIECCDDSGQVIEIIYKSRHNHDPPRKINCMKEGKLSPVGPVTGNSTTADPVRMLNDSDPSTSSKEPVQETPLIPERKRPNSDASDENPEIKVKEEHIDEPEPKRRSKKSSLGNSGSHFKPGKKPKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAIDNTSAVIITYKGIHDHDMPVPKKRHGPPSAPLVAAAAPASMNSLQFKKTEAFQNQISSTQWSVDMEGELAAEELDPGGEKAMESARTLLSIGFEIKPC* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0730 499 MobiDBLite consensus disorder prediction 1 86 - -
Vvi11g0730 499 MobiDBLite consensus disorder prediction 293 331 - -
Vvi11g0730 499 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 128 456 IPR044810 GO:0003700
Vvi11g0730 499 MobiDBLite consensus disorder prediction 109 192 - -
Vvi11g0730 499 MobiDBLite consensus disorder prediction 262 291 - -
Vvi11g0730 499 MobiDBLite consensus disorder prediction 243 349 - -
Vvi11g0730 499 MobiDBLite consensus disorder prediction 109 149 - -
Vvi11g0730 499 Gene3D WRKY domain 345 421 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi11g0730 499 Gene3D WRKY domain 173 248 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi11g0730 499 SMART WRKY_cls 188 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi11g0730 499 SMART WRKY_cls 360 419 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi11g0730 499 Pfam WRKY DNA -binding domain 362 417 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi11g0730 499 Pfam WRKY DNA -binding domain 190 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi11g0730 499 FunFam WRKY transcription factor 347 421 - -
Vvi11g0730 499 MobiDBLite consensus disorder prediction 164 187 - -
Vvi11g0730 499 ProSiteProfiles WRKY domain profile. 183 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi11g0730 499 MobiDBLite consensus disorder prediction 60 86 - -
Vvi11g0730 499 SUPERFAMILY WRKY DNA-binding domain 186 247 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi11g0730 499 SUPERFAMILY WRKY DNA-binding domain 356 420 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi11g0730 499 ProSiteProfiles WRKY domain profile. 355 420 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0730 Vvi-Chr11 7838175 7845358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0730 125 499 WRKY Transcription Factor Family AT4G30935 55.937 2.97e-133 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vvi11g0730 WRKY 2.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0730 - - vvi:100262194 939.488