Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0722 ATGATTAAGCGGACAGCGAACCTTGACTGGTACAAGGACCCTATCCTCCTTGATGCTCTTGACAGGATTCACGAGCCCAAGAGGCTCTTGGACAAGCCTTTTCTTCTCCCACTACAGGCCGTTTGCAAGATTGGTGGCATTGGCGCATTTCCTGTTGGTCACGTTGAAACTGGTACTATTAAACCTGGTATGGTCGTCAAGTTTGGGCCAAGTGGACTCACTACTAAAGTCAAGTCAGCTGAAGTGCACCATGAGTCTTTGGTAGGAGGTCTGTCCGGTGACAAATGTTGGTTTCAGTGTGAAGAATGTTGCTGTCGAGGATCTAAGACGTGGCTTTGTAGCGTCTAA 348 0.4828 MIKRTANLDWYKDPILLDALDRIHEPKRLLDKPFLLPLQAVCKIGGIGAFPVGHVETGTIKPGMVVKFGPSGLTTKVKSAEVHHESLVGGLSGDKCWFQCEECCCRGSKTWLCSV* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0722 115 Gene3D Translation factors 3 106 - -
Vvi11g0722 115 SUPERFAMILY Translation proteins 30 101 IPR009000 -
Vvi11g0722 115 PANTHER ELONGATION FACTOR 1 ALPHA 10 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0722 Vvi-Chr11 7691123 7691470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0722 1 109 Eukaryotic Initiation Factors Gene Family AT5G60390 62.385 1.52e-42 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0722 K03231 - vvi:100244821 146.362