Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0706 ATGCCACCTCACTTATTTACTGGTGGCAAGGTTGAGGGGGAGCAAGGAGCTTCTATCCTTGTCGTTTTGCTTGATGTGGACACTAGCAGTGTTGTTCAAACTGGACCAGAATCAGCAGCCAAACTGAATGTTGTGGTGCTGGAAGGTGACTTCAATGAAGAATCTGATGATGATTGGACCAAAGAGCATTTTGAAAGTCATGAAGTGAAGGAGCGTGAGGGGAAAAGACCGCTTCTGACTGGGGATCTACAGGTGACCCTCAAGGAAGGGATAGGAACTCTGGGAGATCTTACTTTTACAGACAATTCAAGTTGGATAAGGAGCAGAAAGTTTCGCCTTGGGGTGAAAATTGCACCCGGATACTGTGAGGATGTTCATATTCGCGAGGCTAAAACAGAGGCTTTTGCAGTTAAAGATCATAGGGGAGAATTATACAAGAAACATTACCCACCTGCATTACATGACGAAGTTTGGAGATTGGATAGAATTGCCAAGGATGGAGCACTGCACAAAAAATTGGTGAAGGCTGCAATTGTGACTGTTGAAGATTTCCTCCGTTTTCTTGTCAGAGATCCACAGAAATTAAGAAATATCCTTGGGAGTGGAATGTCCAATAGGATGTGGGAGAATACAGTGGAGCATGCCAAGACATGTGTATTGGGTGGGAAGGTCTATGTTTACTTCACTGATGAAACTCATAGCACTGGTGCTGTCTTCAACAATATTTATGAGCTTAGGGGTCTCATTGCTGATGAGCAGTTCCTCCCTCTGGAGTCGCTTACCCACAATCAAAAGATTTCAACGGATTCCCTGGTGAAGAGAGCATATGAGAATTGGAGTCAAGTTGTTGAATATGATGGCAAAGTCCTAAATTCCCTAATCGACAGTAAGAAGGTAACAACATCCTCATCTATACCTATAGTTGATCACGGCCATGTCAGGGATCACTATATTAGAACTGCACCACACAGCAAGAACCATATCCCTTCTGACCCAAGCCCACAATGCCAACATGAAAATAACCACCCATCGGCCAGGCAATTGATCGAATACCCATTTGTGAGGTCTGATCCAACAATGGAGATGGCATTGACAACTCCACAAGCAGCATTATCTAGCAGCATGGATTACATGTCAGCAGGAACTTCTGCAAGGGGGAATCCATATCTTTCAGGAGATTGCTCTCGGTCAAGGAATGGACAGGGATTAGAAGACTATTTCTCCGAGGAAATCCGGCTGAGGAGTTCGGAGATGTTAGAAAATGATGAGATGCAGAGAATGCTAAAAACATTCAATATGGGTGTTGATACTGGGATGGGACCTGCCTTTGGTCATTCTGATGATGCTTGTTATTCCTACAGTATTCCATATGAGCGTCAGATGGATCAAACATTTGGTCAGATGGATCAAGCATTTGGTCAGGTGCATGGCCGGGGAACAGGAAAGGCTGTTGTGGGATGGCTTAAGTTGAGAGCTGCCTTGAGATGGGGAATATTCATAAGGAAGAAAGCAGCAGAGAGGAGAGCTCAGCTTGTTGAGCTAGACTGA 1548 0.4457 MPPHLFTGGKVEGEQGASILVVLLDVDTSSVVQTGPESAAKLNVVVLEGDFNEESDDDWTKEHFESHEVKEREGKRPLLTGDLQVTLKEGIGTLGDLTFTDNSSWIRSRKFRLGVKIAPGYCEDVHIREAKTEAFAVKDHRGELYKKHYPPALHDEVWRLDRIAKDGALHKKLVKAAIVTVEDFLRFLVRDPQKLRNILGSGMSNRMWENTVEHAKTCVLGGKVYVYFTDETHSTGAVFNNIYELRGLIADEQFLPLESLTHNQKISTDSLVKRAYENWSQVVEYDGKVLNSLIDSKKVTTSSSIPIVDHGHVRDHYIRTAPHSKNHIPSDPSPQCQHENNHPSARQLIEYPFVRSDPTMEMALTTPQAALSSSMDYMSAGTSARGNPYLSGDCSRSRNGQGLEDYFSEEIRLRSSEMLENDEMQRMLKTFNMGVDTGMGPAFGHSDDACYSYSIPYERQMDQTFGQMDQAFGQVHGRGTGKAVVGWLKLRAALRWGIFIRKKAAERRAQLVELD* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0706 515 Pfam Calmodulin binding protein central domain 152 218 IPR046830 -
Vvi11g0706 515 Pfam Calmodulin binding protein-like N-terminal domain 3 140 IPR046831 -
Vvi11g0706 515 Pfam Calmodulin binding protein C-terminal domain 223 285 IPR046829 -
Vvi11g0706 515 PANTHER OS02G0177800 PROTEIN 2 424 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0706 Vvi-Chr11 7401428 7406908 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0706 1 515 Calmodulin-binding Proteins AT2G24300 63.532 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0706 - - vvi:100255894 1043.49