Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0687 ATGATGCAGACCACACTAAAGTCACTGCCTATTAAACTGGGAAGCAATATATCATCTGCCAACAGTGATGATCCTAATCTGCAAGTGTTCAGCTTCACTACTATTAAAGTGGCTACGAATAACTTTTCAAGTGAAAATAAGCTTGGGGAGGGTGGATTTGGACCTGTTTACAAGGGTAAATTACCGAAAGGGCAGGAAATAGCAGTGAAGAGACTTTCAAAAACTTCTCATCAAGGGCTTGAGGAGTTCAAGAATGAGGTTACACTCACTGCAACACTACAGCATGTGAATCTTGTTAAACTTTTGGGTTTTTGCACCCAAAGGGAAGAGAAGATGCTCATCTACGAATGCATGCCAAACAAAAGCTTGGATTTCTACCTCTTTGACCCAGAGGGACAGGTTCTCTTAGATTGGGGAAAACGCATACACATCATTGAAGGGATCACTCAGGGGCTTCTATATCTACAGGAGTACTCAAGACTAAGGATAATTCACAGGGATTTGAAGGCTAGCAACATTTTATTAGACGGTGAAATGAAGCCAAAGATTGCAGATTTTGGGATAGCTAGAATTTTCCAAAAAGATGAGAATGAAGCAAACACCGGCCGAATTGTTGGGACATATGGCTATGTCTCCCCTGAATACGTGCAAAAGGGTACCTATTCTGTGAAGTCTGATGTTTATAGCTTTGGAGTTCTCTTATTACAAATTATCAGTGGCAAGAAGAATACATGTTTCTATGGTTTGGATCAAAATTTACACCTTCTTGAATATCTATGGAAGGATGGAAGGATGGTAAGAGCATGGAGTTCATGGATCCATCACTGGATGATGCATGTTCTTCGTGTAAACTGA 855 0.4047 MMQTTLKSLPIKLGSNISSANSDDPNLQVFSFTTIKVATNNFSSENKLGEGGFGPVYKGKLPKGQEIAVKRLSKTSHQGLEEFKNEVTLTATLQHVNLVKLLGFCTQREEKMLIYECMPNKSLDFYLFDPEGQVLLDWGKRIHIIEGITQGLLYLQEYSRLRIIHRDLKASNILLDGEMKPKIADFGIARIFQKDENEANTGRIVGTYGYVSPEYVQKGTYSVKSDVYSFGVLLLQIISGKKNTCFYGLDQNLHLLEYLWKDGRMVRAWSSWIHHWMMHVLRVN* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0687 284 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 118 209 - -
Vvi11g0687 284 Gene3D Phosphorylase Kinase; domain 1 16 117 - -
Vvi11g0687 284 SMART serkin_6 42 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11g0687 284 Gene3D Transferase(Phosphotransferase) domain 1 118 281 - -
Vvi11g0687 284 FunFam Uncharacterized protein 17 117 - -
Vvi11g0687 284 Pfam Protein tyrosine and serine/threonine kinase 45 267 IPR001245 GO:0004672|GO:0006468
Vvi11g0687 284 ProSiteProfiles Protein kinase domain profile. 42 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11g0687 284 SUPERFAMILY Protein kinase-like (PK-like) 21 278 IPR011009 -
Vvi11g0687 284 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 267 - -
Vvi11g0687 284 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0687 Vvi-Chr11 7185197 7188116 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0687 30 261 Receptor kinase-like Gene Family AT4G11530 63.519 2.74e-102 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vvi11g0687 PK_Tyr_Ser-Thr 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0687 - - vvi:100253451 572.778