Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0660 ATGCTCACTATTTGCAATATACCATACAGTCTCTTGGCTGAAGAAAATACAGATATACACCCTCTGTCAGTTGACCATAGACCTGAGTGTGATGATGAGGAAAGAGGCCGTATCGCTGCAAGTAGGGGTGAAGTCAGTCAATTGAATACAGGTACTGGTGTAGAGACCGTCCTTTTGAGATGCTGGCTGGGTGGCTTGCACCTTTCACAATCCATTGGTGATATGGATGTTGGAGAGTTCATTGTTCCGATTCTTCATGTAAAGCAAGTGAAGTTGTCTACAGCTGGTGATACAGCGGCTAGTCGAGTTGTTAAGGAAGCTTACATGTAA 330 0.4424 MLTICNIPYSLLAEENTDIHPLSVDHRPECDDEERGRIAASRGEVSQLNTGTGVETVLLRCWLGGLHLSQSIGDMDVGEFIVPILHVKQVKLSTAGDTAASRVVKEAYM* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0660 109 Gene3D - 5 102 IPR036457 -
Vvi11g0660 109 SUPERFAMILY PP2C-like 16 95 IPR036457 -
Vvi11g0660 109 Pfam Protein phosphatase 2C 11 79 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0660 Vvi-Chr11 6700461 6700790 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0660 19 96 PP2C-type Phosphatase Gene Family AT1G47380 64.103 7.05e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0660 - - nnu:104610582 115.161