Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0653 ATGGCTTTTGATCAGAACTCGATTCCCTTAGATCTGAGGCCATTGAATGTTCCGCGAACGATGGTCGAGGACCCTCGCATTGCCCCCGCCACAACCACGGGCCGGACCACAGAGGGGGTTTTCCCCAACCCAGCCCGTGATGCTGGTAGCCCAGGGTCGGTTCAGATGTTCTATCCGGCCACTGTGTCGGATGCTGGGTTGGTAGGTTTAGGGTTTGGAAATGCGGTGCCAGGTGTTGCCGCTTGGTGCCCTCATGTGCCTGTGGCCATTGGGCGTGCTGGAATTAGTCCAGGAGCGATTGGATTGGGCTATAATCCCAATTTGGGGACTCGGGTTGCTGGCAATGCCTCTGATCAGGCAAGCGATGAAGGTACAGATGACTCGAATTCAGGGAAGAAAGTTAAGTTCTTATGTAGTTTTGGGGGAAAGATTTTGCCTAGGCCAAGTGATGGAATGTTGAGATATGTCGGAGGGCATACAAGAATTATTTGTCTGAGAAGGGACGTGAGCTTTAATGAGTTGGTGCAAAAGATGGTGGATACATATGGGCAACCGGTGGTAATTAAGTATCAGCTACCCGAAGAGGATCTTGATGCATTAGTGTCAGTTTCTTGCCCAGATGATCTTGAAAACATGATGGATGAGTATGAGAAATTAGTTGAGCGATCATCTGATGGATCAGCTAAGTTACGAGTGTTCTTGTTCTCAGCTTCAGAGCTTGATCCCTCTGATATGGTGCAATTTGGAAATTTTAATGATAGTGGGCAAAGATATTTTGATGCTGTGAATGGGATTATGGATGGAATTGGGGGTGGTATTGCTAGAAAGGAGAGTATAGCAAGTGCAACTTCCACACAGAATTCTGATGTGAGTGGAAATGATGCCACTGATAACTTGGTTCAGCATCAAGGGGATGTTAGTGGGCCACCGTTTAGCAGTGCATTATCTCCCAAAGGAAATTCGGCTACATCTAATGAACCTGCTACAAGATTGATGTGTGTGGATCCCAACCCAGCAATCTATGCAGATGTCTCTGCCATTCCATTGGGAATTCCAGTGGGTAATACTGGTCCTCCCCAGACTTCATCTTCTAAGCCTGATGTTGAGTTTGAGAGATCTGTACCCCTTACTGTACAGCCACAGCAAGTGGGGTTTGATTTGCAGCAATGCCGGATGGATATTCCAGCAACCACAGCTTACTTGCAGTCTTATGTGCATCCTCATCGAGAGGTTACTAACCATGCTGATTATGTTCAAGTTCCTCACCAGATGGGGTTCCCAAATCAGCTGTTGGCAACTTCTGGTTCTGTACTGACCCACCAGCAGATCCGTGACAATGCTAGTGGTGTTAGCTCTCATCAATTTATTCCTGCAGTGCACATGACAATGACCCCTACAGCTTCTCATGTCAGTATCAGACCAAGTGTGATTCAGCCATTGGTTCAGCCCCAACAGGCCAGGATAGATTGTTACACTGATGAAAGTACATTTGGGCCAAGGGTTGTCCAGCTTCCACTAGACCAAAGCTATAATCCATATCAAGCCCAGGTCCCACTCCCTCCTGCAGTGGTGGGAGGCTATGGCTGGCATCAAGTCCCAGCACAGGACCATGTAGTCTTATCTGATGGATGGGCTCATCAACAAGTAATTCTTCCAGAGACAACCACAAGGTTGGAGGACTGTTTTATGTGTCAGAAAGAATTGCCTCATGCACACTCTGATCCTTTGGTACAGGGACTGAGAGACAGCAGTGCAAGCTCTGTATCTGATTCAAACTCAGCGTATCATAGCCTCCGATTGGAGGACAATGTGAGAGCCCGTCAAATAAACAGGGTTGTGGTAACTGGAGCCTTGGGGGAAGGCATTATTGAACAAGGAGTTGGTGCTCAGCCGAGGGTTCTTGGTCATATGGATCATCAAGCTGGGACACTTCAATCAGAGGTAGTTGGGATCTGTCAGAACCTTGATGCGCAGCATGAAAATGAGAAAATTATTCTCCAAAAAATGGACAACCCTGATCAACCCAGAGTCCCAATTCCCCAGGGTGTGGTGGGGTTGGCAGGTGCTGTGCAGTCATCTTATGGTGTATTCACGGGCACTATTCCTCAGACTTCCCAAGAAGAGGCTGTCCAGCAGTATGCAGTGCCAACCCAGTACCAGGTTAAACCGGACACCTTAGTGAATAGACCAATTAATAGTGATGTCCCTCTATTTGGAGGTGTGCCTTTACAAACATCAGAACGCCTGGTTCAGGAATCTCCAAGAGACTATTCTGGTAAACTTCCTGGTGTTGTTCCTAAGGAAGATACTGCAGAGTCTTGCATTTCATTTGATCATATGCGTCCAATTGATGAGAGGATGGAAAATCTAAGGGTAGGCCCTGCTGAAAATTTTGTTAATAGTGAGCAGAGTAAATCATCTGCTGATAAACCTAGAAAGGAGGACATCTTGGAACACAGACTGCAGCAAATTGCAGGGAAAGAGGTGCTTCTGGACAGTACATTCAGCAAAGCCAAAATTGTTGTTGAGTCGAATCACAATAAAGCAACTGAGGTGTTGCCTTGCTCTGCTGCTGAAGTTCCTTACCTGCATAATGTTTGGCCAGTGGAGACATATGAAGTAACAAAACTGCCTATTTTGGGAACTCTGGCGACATATACACATTCTAAGACTGGGATTCATAATGTGACTTCTGGTGAAGTTTCTTATGGCAGCCCTGCATTTTCCGATGTTGAATCGGCTTATCTAACAGATAAAGCTCCACCCATATCTGAATGGAATGATGACACCTCGCAGTTTCAGCCAAAGATGGTTCCTACAGATATCAGAGTTGTCTCATCAAATGGTAATACACCTTATTTATCCCCGTCTAACAGAATTGGAGATGTTCAAGATTCCTCAAACTCACTCTTCAGCAGCCAGGATCCTTGGAATTTACGGCATGATATTCATTTCCCCCCTCCTAGACCTAACAAAATTACAATAAAAAATGAAGCCTTTAGTATTAGGGAACCATTTGGTGAAAATGGTACGAGCGATAGTGGGGATATAAATACAGATGTGCAATTGGAGGATGGAGCCCACCAGCCATTTTCCAATTTGGATAAGGATTTCAATTCAGAGCATAGTTGGTCTGCGAAAGGCTCAGGAGAGGAAGTGATCAAACAAGAACTTCAGGCGATTGCTGAGGGTGTTGCTGCTTCTGTTCTCCACTCGACTACATCTAATCCTGAAATTTCTATACACGAGAAAAATGAGCCTCTTTCTTTGTCCAATAAAGATATAGAGCTTCAAGATAGCGATTTGGAAATGCAGCATAAAAGTAAAGTTGAGGACAATATAAACAAAGTGCCAGAAAAAATTAATATGGGCTTCCCAGTGTCAGATGGCATAGGTCGCTTGCAGATCATAAAAAACAGTGACCTTGAAGAGCTCCGAGAATTGGGTTCTGGCACCTTTGGTACTGTTTATCATGGAAAATGGAGGGGCACTGACGTTGCAATCAAACGAATCAATGACAGGTGCTTTGCTGGGAAGCCTTCAGAACAAGAACGTATGAGAGATGACTTCTGGAATGAGGCAATCAAGCTTGCTGATTTGCATCATCCAAATGTGGTAGCTTTCTATGGTGTTGTTCTTGATGGCCCTGGAGGCTCAGTTGCAACTGTTACAGAGTATATGGTTAATGGTTCTTTAAGAAATTCTCTGCAGAAGAATGAAAAGAATCTTGATAAGCGTAAGCGTCTCTTGATTGCCATGGATGTAGCCTTTGGAATGGAGTACTTGCATGGTAAGAATATAGTGCACTTCGACTTGAAAAGTGATAACTTACTTGTCAATCTTCGAGATCCTCACCGCCCAATATGCAAGGTTGGTGATTTGGGCTTATCAAAGGTGAAATGCCAGACACTGATCTCTGGTGGTGTGCGAGGGACACTTCCTTGGATGGCTCCAGAGCTACTGAATGGCAGCAGTAGCCTTGTGTCTGAGAAGGTTGATGTGTTTTCATTCGGTATTGTGATGTGGGAACTTCTTACTGGAGAAGAACCATATGCAGATCTGCATTATGGGGCAATCATTGGTGGTATTGTGAGCAACACCTTGCGGCCATCTGTACCTGAGTTTTGTGACCCAGAATGGAGAGCTCTGATGGAGAGATGTTGGTCTTCAGAACCATCAGAGAGGCCAAGCTTCACCGAAATTGCAAACCAGTTGCGATCTATGGCGGCTAAGATTCCTCCAAAAGGACAAATATCACAGCCCCAGGTTCAAAAATGA 4278 0.4535 MAFDQNSIPLDLRPLNVPRTMVEDPRIAPATTTGRTTEGVFPNPARDAGSPGSVQMFYPATVSDAGLVGLGFGNAVPGVAAWCPHVPVAIGRAGISPGAIGLGYNPNLGTRVAGNASDQASDEGTDDSNSGKKVKFLCSFGGKILPRPSDGMLRYVGGHTRIICLRRDVSFNELVQKMVDTYGQPVVIKYQLPEEDLDALVSVSCPDDLENMMDEYEKLVERSSDGSAKLRVFLFSASELDPSDMVQFGNFNDSGQRYFDAVNGIMDGIGGGIARKESIASATSTQNSDVSGNDATDNLVQHQGDVSGPPFSSALSPKGNSATSNEPATRLMCVDPNPAIYADVSAIPLGIPVGNTGPPQTSSSKPDVEFERSVPLTVQPQQVGFDLQQCRMDIPATTAYLQSYVHPHREVTNHADYVQVPHQMGFPNQLLATSGSVLTHQQIRDNASGVSSHQFIPAVHMTMTPTASHVSIRPSVIQPLVQPQQARIDCYTDESTFGPRVVQLPLDQSYNPYQAQVPLPPAVVGGYGWHQVPAQDHVVLSDGWAHQQVILPETTTRLEDCFMCQKELPHAHSDPLVQGLRDSSASSVSDSNSAYHSLRLEDNVRARQINRVVVTGALGEGIIEQGVGAQPRVLGHMDHQAGTLQSEVVGICQNLDAQHENEKIILQKMDNPDQPRVPIPQGVVGLAGAVQSSYGVFTGTIPQTSQEEAVQQYAVPTQYQVKPDTLVNRPINSDVPLFGGVPLQTSERLVQESPRDYSGKLPGVVPKEDTAESCISFDHMRPIDERMENLRVGPAENFVNSEQSKSSADKPRKEDILEHRLQQIAGKEVLLDSTFSKAKIVVESNHNKATEVLPCSAAEVPYLHNVWPVETYEVTKLPILGTLATYTHSKTGIHNVTSGEVSYGSPAFSDVESAYLTDKAPPISEWNDDTSQFQPKMVPTDIRVVSSNGNTPYLSPSNRIGDVQDSSNSLFSSQDPWNLRHDIHFPPPRPNKITIKNEAFSIREPFGENGTSDSGDINTDVQLEDGAHQPFSNLDKDFNSEHSWSAKGSGEEVIKQELQAIAEGVAASVLHSTTSNPEISIHEKNEPLSLSNKDIELQDSDLEMQHKSKVEDNINKVPEKINMGFPVSDGIGRLQIIKNSDLEELRELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEQERMRDDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNSLQKNEKNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVSNTLRPSVPEFCDPEWRALMERCWSSEPSERPSFTEIANQLRSMAAKIPPKGQISQPQVQK* 1426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0653 1425 Coils Coil 1423 1425 - -
Vvi11g0653 1425 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1135 1229 - -
Vvi11g0653 1425 CDD PB1_UP2 137 235 - -
Vvi11g0653 1425 Gene3D - 154 237 - -
Vvi11g0653 1425 SMART serkin_6 1142 1408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11g0653 1425 SMART PB1_new 148 237 IPR000270 GO:0005515
Vvi11g0653 1425 PANTHER SERINE-THREONINE PROTEIN KINASE 200 1407 - -
Vvi11g0653 1425 SUPERFAMILY Protein kinase-like (PK-like) 1134 1404 IPR011009 -
Vvi11g0653 1425 Gene3D Transferase(Phosphotransferase) domain 1 1230 1424 - -
Vvi11g0653 1425 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1230 1421 - -
Vvi11g0653 1425 MobiDBLite consensus disorder prediction 951 971 - -
Vvi11g0653 1425 MobiDBLite consensus disorder prediction 284 327 - -
Vvi11g0653 1425 PRINTS Tyrosine kinase catalytic domain signature 1224 1237 IPR001245 GO:0004672|GO:0006468
Vvi11g0653 1425 PRINTS Tyrosine kinase catalytic domain signature 1261 1279 IPR001245 GO:0004672|GO:0006468
Vvi11g0653 1425 PRINTS Tyrosine kinase catalytic domain signature 1332 1354 IPR001245 GO:0004672|GO:0006468
Vvi11g0653 1425 PRINTS Tyrosine kinase catalytic domain signature 1376 1398 IPR001245 GO:0004672|GO:0006468
Vvi11g0653 1425 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 153 237 - -
Vvi11g0653 1425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1267 1279 IPR008271 GO:0004672|GO:0006468
Vvi11g0653 1425 ProSiteProfiles Protein kinase domain profile. 1142 1409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11g0653 1425 CDD STKc_MAP3K-like 1148 1405 - -
Vvi11g0653 1425 Pfam Protein tyrosine and serine/threonine kinase 1143 1405 IPR001245 GO:0004672|GO:0006468
Vvi11g0653 1425 ProSitePatterns Protein kinases ATP-binding region signature. 1148 1179 IPR017441 GO:0005524
Vvi11g0653 1425 Gene3D Phosphorylase Kinase; domain 1 1135 1229 - -
Vvi11g0653 1425 SUPERFAMILY CAD & PB1 domains 149 241 - -
Vvi11g0653 1425 Pfam PB1 domain 153 236 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0653 Vvi-Chr11 6573516 6581463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0653 99 640 MAP Kinase Kinase Kinase AT3G46920 38.584 7.75e-97 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Vvi11g0653 PK_Tyr_Ser-Thr 3.3e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0653 - - vvi:100251651 2874.34