Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0635 ATGGCGACGGCTTCTTCCTCCCTTCACCAACCCATATTCCCACAATATCCTTCTCTTTCTCGCAGTTCTCGATTCCACCCTCCCCTTCGTCTTTCCTCTCTTCGCTTTCCCTCCAGAATTCGTGCTAGCTCAGCAGTCGCTCTTGAACCGGAATCAAGCCCTCAGCTGAATAATGATATGGATTTTGACTTGTTTTCATGTCCAGTGTGTTATGAACCGCTAATCAGAAAAGGCCCTCCAGGTCTTAACTTGCCAGCAATCTACAGGTCTGGTTTCAAATGTAAGACTTGCAATAAGTCATATTCCAGCAAAGACATGTATCTGGATCTCACTATTACTGCTGGGTCAAAGGCCTACAATGAAGCTCAACCAGTTAGAACTGAGTTATTCCGGAGTCCACTTGTTTCATTTTTGTATGAAAGAGGCTGGCGTCAAAATTTTAACCTGAGGGGTTTCCCTGGTCCTGATGAGGAGTTCAAAATGGCTCAAGAGTACTTTAAACCTGCAGCAGGTGGGCTTCTGGTAGATGTCAGCTGTGGGAGTGGCTTGTTTTCTCGAAAATTTGCAGAATCTGGGACCTATTCTGGAGTTGTTGCACTTGATTTTTCCGAAAATATGCTTCATCAATGTTATGATTTCATTAAGAAAGATAACCCTAGTTTAACGACTAATCTTGCTCTTGTTAGAGCAGATATTTCTAGGCTTCCCTTTTCATCAGGTTCAGTTGATGCTGTTCATGCCGGTGCAGCTTTGCATTGTTGGCCATCACCTTCTAATGCAGTTGCTGAAATCACTCGTATATTACGAAGTGGAGGTATCTTTGTAGGAACCACTTTTCTACGACCCATTTATACCAATTCCTCCATTCCTGCGATATTAAGGCCTTTCAGACAGTCTATTCTTCAAACCTCCAACTATCTGACGGAGAAGGAGATTGAAGACCTGTGCAGATCATGCGCCCTTATCAACTACACAAGCACAATTCAGCAATCATTCATCATGTTTTCCGCACAGAAGGCTTGA 1023 0.435 MATASSSLHQPIFPQYPSLSRSSRFHPPLRLSSLRFPSRIRASSAVALEPESSPQLNNDMDFDLFSCPVCYEPLIRKGPPGLNLPAIYRSGFKCKTCNKSYSSKDMYLDLTITAGSKAYNEAQPVRTELFRSPLVSFLYERGWRQNFNLRGFPGPDEEFKMAQEYFKPAAGGLLVDVSCGSGLFSRKFAESGTYSGVVALDFSENMLHQCYDFIKKDNPSLTTNLALVRADISRLPFSSGSVDAVHAGAALHCWPSPSNAVAEITRILRSGGIFVGTTFLRPIYTNSSIPAILRPFRQSILQTSNYLTEKEIEDLCRSCALINYTSTIQQSFIMFSAQKA* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0635 340 Gene3D Vaccinia Virus protein VP39 130 339 IPR029063 -
Vvi11g0635 340 CDD AdoMet_MTases 174 280 - -
Vvi11g0635 340 Pfam Methyltransferase domain 175 275 IPR013216 GO:0008168
Vvi11g0635 340 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 138 326 IPR029063 -
Vvi11g0635 340 PANTHER METHYLTRANSFERASE 85 323 - -
Vvi11g0635 340 FunFam Putative methyltransferase, chloroplastic 130 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0635 Vvi-Chr11 6382691 6395091 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vvi11g0635 Methyltransf_11 4.9e-20 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0635 - - vvi:100249966 649.047