Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0634 ATGATCATGGGAATTCAGAAACCAGCATGGTTGGAAGCCCTCTACACCCAGAAATTCTTCGTGAGCTGCTCAATTCATGAAACTGCAAAGAAGAATGAGAAGAATATCCTTTGTTTGGATTGTTGCACCAGTATTTGCCCTCATTGCTTGCAGTTCCATCGCTTCCATAGGCTTGTTCAGGTTCGTCGTTATGTGTATCATGATGTTGTCAGATTGGAAGACCTCGAGAAGCTCATAGACTGCTCCAATGTTCAGGCCTATACTATTAATAGCGCAAAAGTGGTGTTCATCAAGAAACGACCTCAGAATAGGCAGTTTAAAGGGTCTGGAAACTATTGTACTTCCTGTGACAGGAGCCTCCAAGAACCTTATATCCACTGCTCTCTTGGCTGCAAGGTGGACTTTTTGCTGAAACACAACAAGGACCTCTCCCCATACTTGAGGACATGCCACTCTCTACAACTCAGTCCAGACTTCTTGGTCCCTCCAGACATGGGAGAGGATGAGATGACCAATGAGACACCCCACTCGACGATCGTGGACTGCGATGAGCCAATGAGCTCGTCTTCGGGCTCTTCCGGTTCGGAGAACATGAGCATGATGTGCACTGAGATAGTCCGAAAGAAGCGGAGTGGACTGTATGTGTGTGGAAGATCAGCTAGTAAGGTTTCAGAAGAGGACATGGCTACAAGCATGAGTAGAAGAAAAGGCATTCCTCATAGATCTCCTATGTGTTAG 738 0.4634 MIMGIQKPAWLEALYTQKFFVSCSIHETAKKNEKNILCLDCCTSICPHCLQFHRFHRLVQVRRYVYHDVVRLEDLEKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPYIHCSLGCKVDFLLKHNKDLSPYLRTCHSLQLSPDFLVPPDMGEDEMTNETPHSTIVDCDEPMSSSSGSSGSENMSMMCTEIVRKKRSGLYVCGRSASKVSEEDMATSMSRRKGIPHRSPMC* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0634 245 Pfam PLATZ transcription factor 62 133 IPR006734 -
Vvi11g0634 245 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 6 244 - -
Vvi11g0634 245 MobiDBLite consensus disorder prediction 168 198 - -
Vvi11g0634 245 MobiDBLite consensus disorder prediction 226 245 - -
Vvi11g0634 245 MobiDBLite consensus disorder prediction 172 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0634 Vvi-Chr11 6377624 6378782 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vvi11g0634 PLATZ 1.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0634 - - vvi:100244833 508.449