Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0630 ATGGTGACACTGAAAGCAGGAAGCAGACCGCCATGGGTGGGTTTGGGAGCTGCAGTTTGGGTACAGATTGCATCAGGCAATGCCTACACCTTTCCTCTCTACTCCCATTCTCTTAAATCCGTTTTGGGATTCAACCAGCACCAGCTCACCATGCTCGGCGTCGCCAACGACATCGGCGAGAACGTTGGCCTTCTACCGGGCGTTGTCTGCAACAAGTTCCCTCCTTGGGTTGTTCTTTCGATCGGTGCTTTTGCCTGCTTCCTTGGGTATGGTGTTCTTTGGCTTGCCTTGAGCCGTACTCTTCTGTCCTTACCTTTTTGGTTGTTATGGTTTGCACTTTGTGTTGCCACCAACAGTAGTGCTTGGTTGAGCACATCTGTGCTTGTGACCAACATGAGAAACTTCCCTCTCAGTCGGGGCACAGTAGCAGGCATTCTCAAAGGTTATGGGGGCCTCAGTGCTGCAGTATATACTGAAATTTACACCACAACACTTCACAAATCCTCGTCCGAGCTTTTGATGTTCCTTGCCCTTGGTGTTCCTCTTATATGTTTCACCATGATGTATTTCATCAGGCCTTGTACTCCAGCTTCTGGGGAAGACTCTGCACAGCATGGCCATTTTCTTTTTACTCAGGCTGCCAGTGTTGTGCTCGGCTCATATCTTCTCACAACTACAATATTGAATGATATATTTTCTTTAAGTGCTCCAATTTCCTATACTTTTCTTGCTGCAATGGTTCTCCTTCTCATGGCTCCACTAGCAATTCCTATAAAGATGACCTTGAACCCCACAAATCGCAGCAAATCAGGGATGCTCAACCAACCAGTTGGGTCTTCAGAAAGTATGCTTCAAGGAGAGGAAAATGCAGACAAAACAGAACCATTGCTGACACCATCTTCGTCAACAGCAAGCCTTGGAAGTTTTCACAAGAATGACTGTGTGTCAGAGATAGATATGCTCCTTGCTGAGGGAGAGGGGGCAGTGAAGAAAAAGAGAAGACCCCGAAGAGGGGAAGACTTCAAGTTCACTGAAGCTTTAGTCAAGGTTGATTTCTGGCTTCTGTTCTTAGTCTACTTTGCTGGTGTGGGTTCTGGGGTAACTGTTCTCAATAACCTGGCCCAGATAGGGATTGCACAAGGTGTGCATAACACCACAATGTTGTTATGTCTCTTCAGCTTTTGTAATTTCTTGGGCCGTCTTGGTGGAGGTGCTGTTTCTGAACATTTTCTCAGGTCAAAAACAATCCCTCGGACAATTTGGATGACATGCACTCAAGTAATTATGGTCATTACATACCTGCTGTTTGCTTCTGCTCTTGATGGTACCCTCTATGCTGCAACTGCATTACTTGGGATCTGCTATGGTGTTCAATTTTCTATCATGGTCCCGACTGTCTCTGAGCTTTTTGGCTTGAAGCATTTTGGTATTTTTTACAATTTCATGTCGCTGGGGAATCCTCTTGGTGCCTTTCTATTCTCTGGTCTCCTTGCAGGGTTTGTGTATGATAATGAGGCAGCAAAGCAGCAAGGAATGAATCTACTCAATTCAAGTGTCTCTTGCTTGGGTCCAAATTGTTTTAGACTCACCTTCCTGGTTCTGGCTGGTGTCTGTGGTGTGGGCTCCATCCTGAGCATAATTCTGACCATGAGAATCAGACCTGTTTACCAAATGTTATATTCAGGAGGCTCCTTCAGGCTACCTCAAAATTCAGATCATTGA 1722 0.4576 MVTLKAGSRPPWVGLGAAVWVQIASGNAYTFPLYSHSLKSVLGFNQHQLTMLGVANDIGENVGLLPGVVCNKFPPWVVLSIGAFACFLGYGVLWLALSRTLLSLPFWLLWFALCVATNSSAWLSTSVLVTNMRNFPLSRGTVAGILKGYGGLSAAVYTEIYTTTLHKSSSELLMFLALGVPLICFTMMYFIRPCTPASGEDSAQHGHFLFTQAASVVLGSYLLTTTILNDIFSLSAPISYTFLAAMVLLLMAPLAIPIKMTLNPTNRSKSGMLNQPVGSSESMLQGEENADKTEPLLTPSSSTASLGSFHKNDCVSEIDMLLAEGEGAVKKKRRPRRGEDFKFTEALVKVDFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVHNTTMLLCLFSFCNFLGRLGGGAVSEHFLRSKTIPRTIWMTCTQVIMVITYLLFASALDGTLYAATALLGICYGVQFSIMVPTVSELFGLKHFGIFYNFMSLGNPLGAFLFSGLLAGFVYDNEAAKQQGMNLLNSSVSCLGPNCFRLTFLVLAGVCGVGSILSIILTMRIRPVYQMLYSGGSFRLPQNSDH* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0630 573 Gene3D MFS general substrate transporter like domains 347 556 IPR036259 -
Vvi11g0630 573 Pfam Nodulin-like 11 258 IPR010658 -
Vvi11g0630 573 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 557 - -
Vvi11g0630 573 MobiDBLite consensus disorder prediction 267 304 - -
Vvi11g0630 573 SUPERFAMILY MFS general substrate transporter 214 554 IPR036259 -
Vvi11g0630 573 SUPERFAMILY MFS general substrate transporter 12 196 IPR036259 -
Vvi11g0630 573 CDD MFS_Mch1p_like 10 541 - -
Vvi11g0630 573 MobiDBLite consensus disorder prediction 267 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0630 Vvi-Chr11 6334768 6339245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0630 5 573 Nodulin-like Gene Family AT1G80530 59.649 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0630 - - vvi:100251745 1119.76