Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0610 ATGGCGATTCTGTCAGATCTCGGCACTGAGATCTTGGTTCCGGCCTGCGCCATCGTCGGGATCGTCTTCTCTGTGGTTCAGTGGATTCTGGTCTCCCGCGTCAAGCTTTCTCCAGAGCGGCACTCGCTCTCTAACTCCAGCAAGAATGGCACCGCTGAGTACCTGATTGAGGAAGAAGAAGGCCTCAATGATCACAGCGTCGTTCAGAAATGCGCTGAGATACAGAATGCTATCTCTGAAGGAGCAACCTCTTTCCTCTATACCGAATATCAGTATGTTGGAATTTTCATGGTTGCTTTTGCAATCTTGATTTTCGTTTTCCTTGGCTCTGTGGAGGGTTTCAGCACAAAGAGCCAGCCTTGCTTATACAACAAAGGAGAGATGTGTAAGCCAGCACTTGCCAATGCTATCTTCAGCACAATATCCTTCTTGCTCGGTGGTTTAACTTCTCTGCTTTCTGGTTTCCTTGGGATGAAAATTGCTACTTATGCAAATGCCAGAACCACTCTGGAGGCAAGGAAGGGTGTTGGGAAGGCTTTTATCACTGCATTTAGATCTGGTGCAGTCATGGGATTCCTTCTTGCTGCAAATGGTCTTTTGGTCCTCTATATTGCCATCAACCTCTTCGAGATATACTATGGTGATGACTGGGAAGGCCTTTATGAGGCTATAACTGGTTATGGCCTTGGTGGTTCTTCCATGGCTCTCTTTGGCAGAGTAGGTGGAGGTATCTATACAAAAGCTGCTGATGTTGGTGCAGATCTTGTGGGCAAGGTTGAGAGGGGAATTCCTGAGGATGACCCGAGAAATCCAGCTGTTATAGCTGACAATGTTGGTGATAATGTTGGGGATATTGCTGGGATGGGAGCTGACCTTTTTGGTTCGTATGCTGAGTCATCATGTGCTGCCCTTGTGGTTGCTTCCATCTCCTCATTTGGGATCAATCATGAAATGACTGCAATGTTCTATCCTCTCATCATTAGTTCCATAGGCATTCTTGTTTGTTTGATCACCACCTTATTTGCAACTGACTTTTTTGAGATCAAAGCTGTAAAGGAAATTGAGCCAGCACTGAAGAAGCAGCTCATCATCTCCACTATTTTGATGACTGCTGGAATTGCATTTGTTAGTTGGATTGCTCTTCCATCTTCCTTCACCATCTTCAATTTTGGAAGCCAAAAGGTTGTGAAGAACTGGCAGCTGTTCTTGTGCGTTGGAGTTGGCCTCTGGGCTGGGCTTATTATTGGATTTGTAACAGAGTATTATACTAGCAACACATACAGCCCTGTGCAGGATGTCGCTGATTCCTGCCGGACTGGAGCTGCTACAAATGTTATTTTTGGCCTTGCATTAGGATACAAATCTGTCATTATACCTATTTTTGCCATTGCAGTGAGCATTTTTGTCAGTTTCAGCTTTGCTGCTATGTATGGTATTGCAGTAGCTGCCCTTGGGATGCTGAGCACAATTGCTACCGGATTGGCCATTGATGCTTATGGTCCCATCAGTGACAATGCTGGAGGCATTGCTGAAATGGCTGGCATGAGCCACAGAATCCGTGAGAGAACTGATGCCCTTGATGCTGCAGGAAACACCACTGCTGCTATTGGAAAGGGTTTTGCAATTGGGTCTGCAGCTCTAGTGTCCCTGGCCCTCTTTGGTGCCTTTGTGAGCCGTGCAGCTATTTCAACAGTTGATGTCCTGACTCCAAAAGTTTTCATTGGTTTGCTTGTGGGTGCAATGCTTCCTTACTGGTTCTCTGCAATGACAATGAAGAGTGTTGGAAGTGCAGCTCTAAAGATGGTTGAGGAAGTGCGCCGACAATTCAATACCATCCCAGGTCTCATGGAAGGCACTGCCAAGCCTGATTATGCCACCTGTGTTAAGATCTCTACTGACGCTTCAATCAAAGAGATGATACCACCTGGTGCCCTTGTCATGCTCACTCCCCTCATAGTTGGGACCTTGTTGGGTGTAGAAACTCTAGCTGGTGTTCTTGCCGGATCTCTTGTCTCTGGTGTCCAGATTGCCATCTCTGCTTCCAACACTGGTGGTGCTTGGGATAATGCCAAGAAGTATATTGAGGCTGGGGCTTCAGAGCATGCAAAGGCCCTCGGTCCAAAAGGATCGGACCCACACAAGGCAGCTGTGATTGGTGACACAATTGGGGACCCTCTCAAGGACACTTCTGGCCCGTCTCTCAACATCCTCATCAAGCTAATGGCAGTTGAATCTCTTGTCTTTGCTCCCTTTTTTGCTGCACATGGTGGCCTGCTTTTCAAGATTTGGAAGTAG 2295 0.4693 MAILSDLGTEILVPACAIVGIVFSVVQWILVSRVKLSPERHSLSNSSKNGTAEYLIEEEEGLNDHSVVQKCAEIQNAISEGATSFLYTEYQYVGIFMVAFAILIFVFLGSVEGFSTKSQPCLYNKGEMCKPALANAIFSTISFLLGGLTSLLSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFEIYYGDDWEGLYEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERGIPEDDPRNPAVIADNVGDNVGDIAGMGADLFGSYAESSCAALVVASISSFGINHEMTAMFYPLIISSIGILVCLITTLFATDFFEIKAVKEIEPALKKQLIISTILMTAGIAFVSWIALPSSFTIFNFGSQKVVKNWQLFLCVGVGLWAGLIIGFVTEYYTSNTYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLLVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGTLLGVETLAGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHAKALGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFAAHGGLLFKIWK* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0610 764 Pfam Inorganic H+ pyrophosphatase 41 748 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vvi11g0610 764 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 7 753 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vvi11g0610 764 NCBIfam V-type H(+)-translocating pyrophosphatase 9 758 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vvi11g0610 764 PIRSF H+-PPtase 10 761 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vvi11g0610 764 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 4 753 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0610 Vvi-Chr11 6011013 6016515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0610 2 626 Primary Pumps ATPases AT1G15690 86.169 0.0 1096
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0610 K23025 - vvi:100232894 1469.14