Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g0540 ATGACTACAAAGATCAGAGCAGCCCTTGTGGTGGTGGCACTGGCTGCACTCTTACACACTGCAGTGGTGGTGGCACAGACTACTCATGTTGTTGGTGATAGCTTGGGGTGGCTGGTGCCTCCCGGCGGCCCCATCGCCTACGCCACCTGGGCTGATACCCAGACTTTTGTGGTTGGCGACATATTGGTGTTCAATTTCACTACTGGAGAACAAGATGTAGCTAGAGTTAGCAAGGAAGGTTTCGATTCCTGCAACTCCACCAACCCAATCTCCCTCAAAACAACTGGTCCGGCCAACTTTACTTTGGACACGGTGGGGGATTACTATTTCATTGGCACTATGGACAGGCACTGCCCATTGGGACAAAAGCTAGCCATTAAGGTGATTGATTCTTCTGCAGGGCCCAGTCCTCCTCCTTCTCCACGCTCGCCGGTGACCTACACTGTAGGAGACATATTGGGTTGGGTCGTCCCTCCTCTTGGTGAAGTTGCCTACTCTACTTGGGCTTACAACAAGATCTTCATCGTCGGCGACAGTCTCGTTTTCAACTTCATCAACGGAACACAGGACGTAGCGGTGGTGACAAAGGAGGCTTACGACTCCTGCAACACCAGCAGCACCATCACCGTCTATGCCACCAGTCCAACGACAATCACTCTCACCACCACCGGCATGCACTACTTCTCTTCCACCTACGAGCTCCACTGCGGCTTAGGTCAAAAGCTAGCCATTAACGTCATCGCCAAAAGCACCACCCCATCTCCGTCAGGCGCAGCCACTCCACCATCCAGCTCCGTCGGCGCTTCTCCCAGTGCAGGTGGACCCACAGCTCCTCCCCCATCCAGTTCAGCCCCGTCCCGGATCGTCGCCGGAGCTATCGCTTTGTTATCTATTGCCGTAGCTTTCCTGCACTAA 915 0.5421 MTTKIRAALVVVALAALLHTAVVVAQTTHVVGDSLGWLVPPGGPIAYATWADTQTFVVGDILVFNFTTGEQDVARVSKEGFDSCNSTNPISLKTTGPANFTLDTVGDYYFIGTMDRHCPLGQKLAIKVIDSSAGPSPPPSPRSPVTYTVGDILGWVVPPLGEVAYSTWAYNKIFIVGDSLVFNFINGTQDVAVVTKEAYDSCNTSSTITVYATSPTTITLTTTGMHYFSSTYELHCGLGQKLAINVIAKSTTPSPSGAATPPSSSVGASPSAGGPTAPPPSSSAPSRIVAGAIALLSIAVAFLH* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g0540 304 PANTHER BLUE COPPER PROTEIN 146 256 IPR039391 GO:0009055
Vvi11g0540 304 CDD Phytocyanin 145 246 - -
Vvi11g0540 304 MobiDBLite consensus disorder prediction 253 271 - -
Vvi11g0540 304 FunFam Cupredoxin superfamily protein 144 252 - -
Vvi11g0540 304 Pfam Plastocyanin-like domain 162 240 IPR003245 GO:0009055
Vvi11g0540 304 Pfam Plastocyanin-like domain 46 122 IPR003245 GO:0009055
Vvi11g0540 304 ProSiteProfiles Phytocyanin domain profile. 145 248 IPR003245 GO:0009055
Vvi11g0540 304 SUPERFAMILY Cupredoxins 145 247 IPR008972 -
Vvi11g0540 304 ProSiteProfiles Phytocyanin domain profile. 27 130 IPR003245 GO:0009055
Vvi11g0540 304 SUPERFAMILY Cupredoxins 27 129 IPR008972 -
Vvi11g0540 304 Gene3D - 145 258 IPR008972 -
Vvi11g0540 304 Gene3D - 27 137 IPR008972 -
Vvi11g0540 304 FunFam Cupredoxin superfamily protein 26 133 - -
Vvi11g0540 304 MobiDBLite consensus disorder prediction 253 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi11g0540 Vvi-Chr11 4932464 4933547 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi11g0540 148 256 Phytocyanin Superfamily AT2G25060 39.823 1.22e-18 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g0540 - - vvi:100268054 484.182